Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LIMK1P53667 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK1P53667 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.84■□□□□ 0.13
LIMK1P53667 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.84■□□□□ 0.13
LIMK1P53667 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.84■□□□□ 0.13
LIMK1P53667 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.84■□□□□ 0.13
LIMK1P53667 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.84■□□□□ 0.13
LIMK1P53667 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.84■□□□□ 0.13
LIMK1P53667 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.84■□□□□ 0.13
LIMK1P53667 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK1P53667 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK1P53667 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.84■□□□□ 0.13
LIMK1P53667 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK1P53667 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK1P53667 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK1P53667 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.84■□□□□ 0.13
LIMK1P53667 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK1P53667 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.84■□□□□ 0.13
LIMK1P53667 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LIMK1P53667 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.84■□□□□ 0.13
LIMK1P53667 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK1P53667 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.84■□□□□ 0.13
LIMK1P53667 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.84■□□□□ 0.13
LIMK1P53667 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.84■□□□□ 0.13
LIMK1P53667 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.84■□□□□ 0.13
LIMK1P53667 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK1P53667 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK1P53667 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK1P53667 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
LIMK1P53667 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK1P53667 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LIMK1P53667 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
LIMK1P53667 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.83■□□□□ 0.13
LIMK1P53667 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LIMK1P53667 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
LIMK1P53667 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LIMK1P53667 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LIMK1P53667 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.83■□□□□ 0.12
LIMK1P53667 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.83■□□□□ 0.12
LIMK1P53667 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
LIMK1P53667 AC005229.1-201ENST00000392885 409 ntBASIC15.83■□□□□ 0.12
LIMK1P53667 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.83■□□□□ 0.12
LIMK1P53667 YBX1P6-201ENST00000442962 1002 ntBASIC15.83■□□□□ 0.12
LIMK1P53667 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LIMK1P53667 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.83■□□□□ 0.12
LIMK1P53667 AC079316.1-201ENST00000548397 411 ntBASIC15.83■□□□□ 0.12
LIMK1P53667 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.83■□□□□ 0.12
LIMK1P53667 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.83■□□□□ 0.12
LIMK1P53667 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.83■□□□□ 0.12
LIMK1P53667 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.83■□□□□ 0.12
LIMK1P53667 AC061975.2-201ENST00000581722 295 ntBASIC15.83■□□□□ 0.12
LIMK1P53667 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.83■□□□□ 0.12
LIMK1P53667 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LIMK1P53667 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
LIMK1P53667 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LIMK1P53667 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.83■□□□□ 0.12
LIMK1P53667 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LIMK1P53667 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.83■□□□□ 0.12
LIMK1P53667 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LIMK1P53667 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LIMK1P53667 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.83■□□□□ 0.12
LIMK1P53667 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
LIMK1P53667 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LIMK1P53667 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.83■□□□□ 0.12
LIMK1P53667 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LIMK1P53667 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.83■□□□□ 0.12
LIMK1P53667 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.83■□□□□ 0.12
LIMK1P53667 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LIMK1P53667 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LIMK1P53667 AC007950.2-201ENST00000615045 2347 ntBASIC15.83■□□□□ 0.12
LIMK1P53667 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LIMK1P53667 AC006538.1-201ENST00000567905 1585 ntBASIC15.83■□□□□ 0.12
LIMK1P53667 AC022188.1-201ENST00000620960 1664 ntBASIC15.83■□□□□ 0.12
LIMK1P53667 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LIMK1P53667 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.82■□□□□ 0.12
LIMK1P53667 AC005915.1-201ENST00000624912 2018 ntBASIC15.82■□□□□ 0.12
LIMK1P53667 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LIMK1P53667 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.82■□□□□ 0.12
LIMK1P53667 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LIMK1P53667 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LIMK1P53667 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LIMK1P53667 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.82■□□□□ 0.12
LIMK1P53667 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.82■□□□□ 0.12
LIMK1P53667 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LIMK1P53667 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LIMK1P53667 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.82■□□□□ 0.12
LIMK1P53667 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
LIMK1P53667 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.82■□□□□ 0.12
LIMK1P53667 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.82■□□□□ 0.12
LIMK1P53667 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.82■□□□□ 0.12
LIMK1P53667 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.82■□□□□ 0.12
LIMK1P53667 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.82■□□□□ 0.12
LIMK1P53667 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.82■□□□□ 0.12
LIMK1P53667 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.82■□□□□ 0.12
LIMK1P53667 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.82■□□□□ 0.12
LIMK1P53667 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LIMK1P53667 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
LIMK1P53667 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.82■□□□□ 0.12
LIMK1P53667 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LIMK1P53667 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms