Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LBX1P52954 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.76■□□□□ 0.43
LBX1P52954 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LBX1P52954 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LBX1P52954 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.76■□□□□ 0.43
LBX1P52954 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.76■□□□□ 0.43
LBX1P52954 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.76■□□□□ 0.43
LBX1P52954 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LBX1P52954 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
LBX1P52954 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.76■□□□□ 0.43
LBX1P52954 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.76■□□□□ 0.43
LBX1P52954 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LBX1P52954 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.76■□□□□ 0.43
LBX1P52954 BRI3P1-201ENST00000440440 378 ntBASIC17.76■□□□□ 0.43
LBX1P52954 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC17.76■□□□□ 0.43
LBX1P52954 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC17.76■□□□□ 0.43
LBX1P52954 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC17.76■□□□□ 0.43
LBX1P52954 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.76■□□□□ 0.43
LBX1P52954 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.76■□□□□ 0.43
LBX1P52954 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.76■□□□□ 0.43
LBX1P52954 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.76■□□□□ 0.43
LBX1P52954 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LBX1P52954 AC073413.1-201ENST00000603927 732 ntBASIC17.76■□□□□ 0.43
LBX1P52954 ENPP7P14-201ENST00000621765 1040 ntBASIC17.76■□□□□ 0.43
LBX1P52954 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.76■□□□□ 0.43
LBX1P52954 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LBX1P52954 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
LBX1P52954 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
LBX1P52954 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LBX1P52954 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LBX1P52954 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LBX1P52954 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.76■□□□□ 0.43
LBX1P52954 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.76■□□□□ 0.43
LBX1P52954 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.76■□□□□ 0.43
LBX1P52954 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LBX1P52954 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LBX1P52954 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LBX1P52954 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC17.75■□□□□ 0.43
LBX1P52954 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.75■□□□□ 0.43
LBX1P52954 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LBX1P52954 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LBX1P52954 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.75■□□□□ 0.43
LBX1P52954 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LBX1P52954 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.75■□□□□ 0.43
LBX1P52954 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LBX1P52954 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
LBX1P52954 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LBX1P52954 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LBX1P52954 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC17.75■□□□□ 0.43
LBX1P52954 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC17.75■□□□□ 0.43
LBX1P52954 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.75■□□□□ 0.43
LBX1P52954 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LBX1P52954 SERBP1P2-201ENST00000436888 1164 ntBASIC17.75■□□□□ 0.43
LBX1P52954 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.75■□□□□ 0.43
LBX1P52954 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC17.75■□□□□ 0.43
LBX1P52954 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
LBX1P52954 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.75■□□□□ 0.43
LBX1P52954 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.75■□□□□ 0.43
LBX1P52954 AC124947.2-201ENST00000547118 1133 ntBASIC17.75■□□□□ 0.43
LBX1P52954 AC068587.8-201ENST00000641239 219 ntBASIC17.75■□□□□ 0.43
LBX1P52954 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.75■□□□□ 0.43
LBX1P52954 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LBX1P52954 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.75■□□□□ 0.43
LBX1P52954 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LBX1P52954 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LBX1P52954 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LBX1P52954 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.75■□□□□ 0.43
LBX1P52954 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.75■□□□□ 0.43
LBX1P52954 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LBX1P52954 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LBX1P52954 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LBX1P52954 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.75■□□□□ 0.43
LBX1P52954 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LBX1P52954 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LBX1P52954 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LBX1P52954 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LBX1P52954 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
LBX1P52954 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.74■□□□□ 0.43
LBX1P52954 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LBX1P52954 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.74■□□□□ 0.43
LBX1P52954 RNU1-114P-201ENST00000365297 166 ntBASIC17.74■□□□□ 0.43
LBX1P52954 HCG27-204ENST00000424675 895 ntTSL 3 BASIC17.74■□□□□ 0.43
LBX1P52954 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LBX1P52954 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LBX1P52954 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LBX1P52954 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC17.74■□□□□ 0.43
LBX1P52954 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.74■□□□□ 0.43
LBX1P52954 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.74■□□□□ 0.43
LBX1P52954 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC17.74■□□□□ 0.43
LBX1P52954 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.74■□□□□ 0.43
LBX1P52954 AC027139.1-201ENST00000565286 951 ntBASIC17.74■□□□□ 0.43
LBX1P52954 OR10B1P-201ENST00000601666 907 ntBASIC17.74■□□□□ 0.43
LBX1P52954 AC244250.3-201ENST00000620749 366 ntBASIC17.74■□□□□ 0.43
LBX1P52954 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.74■□□□□ 0.43
LBX1P52954 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LBX1P52954 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.74■□□□□ 0.43
LBX1P52954 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LBX1P52954 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LBX1P52954 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LBX1P52954 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms