Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
TUBP50607 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBP50607 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBP50607 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.97■□□□□ 0.31
TUBP50607 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.97■□□□□ 0.31
TUBP50607 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBP50607 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.97■□□□□ 0.31
TUBP50607 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBP50607 TSSK5P-201ENST00000423978 907 ntBASIC16.97■□□□□ 0.31
TUBP50607 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.97■□□□□ 0.31
TUBP50607 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBP50607 FAM207CP-201ENST00000443486 507 ntBASIC16.97■□□□□ 0.31
TUBP50607 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBP50607 AC004890.2-204ENST00000481968 304 ntBASIC16.97■□□□□ 0.31
TUBP50607 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.97■□□□□ 0.31
TUBP50607 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.97■□□□□ 0.31
TUBP50607 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.97■□□□□ 0.31
TUBP50607 MIR4745-201ENST00000577608 62 ntBASIC16.97■□□□□ 0.31
TUBP50607 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.97■□□□□ 0.31
TUBP50607 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
TUBP50607 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBP50607 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBP50607 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBP50607 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBP50607 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBP50607 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBP50607 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.97■□□□□ 0.31
TUBP50607 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TUBP50607 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.97■□□□□ 0.31
TUBP50607 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBP50607 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBP50607 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TUBP50607 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.96■□□□□ 0.31
TUBP50607 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
TUBP50607 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
TUBP50607 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TUBP50607 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.96■□□□□ 0.31
TUBP50607 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBP50607 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TUBP50607 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TUBP50607 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBP50607 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
TUBP50607 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TUBP50607 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBP50607 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBP50607 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBP50607 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.96■□□□□ 0.31
TUBP50607 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.96■□□□□ 0.31
TUBP50607 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.96■□□□□ 0.31
TUBP50607 AL512638.1-201ENST00000457493 794 ntBASIC16.96■□□□□ 0.31
TUBP50607 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TUBP50607 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.96■□□□□ 0.31
TUBP50607 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.96■□□□□ 0.31
TUBP50607 AL589739.1-201ENST00000607720 493 ntBASIC16.96■□□□□ 0.31
TUBP50607 TEX28P1-201ENST00000613479 1221 ntBASIC16.96■□□□□ 0.31
TUBP50607 TEX28P2-201ENST00000617764 1221 ntBASIC16.96■□□□□ 0.31
TUBP50607 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TUBP50607 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.96■□□□□ 0.31
TUBP50607 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBP50607 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TUBP50607 AC024909.3-201ENST00000611513 2257 ntBASIC16.96■□□□□ 0.31
TUBP50607 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBP50607 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBP50607 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TUBP50607 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBP50607 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBP50607 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBP50607 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TUBP50607 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TUBP50607 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TUBP50607 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TUBP50607 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TUBP50607 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TUBP50607 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.95■□□□□ 0.3
TUBP50607 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBP50607 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBP50607 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBP50607 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBP50607 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.95■□□□□ 0.3
TUBP50607 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.95■□□□□ 0.3
TUBP50607 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBP50607 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TUBP50607 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBP50607 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TUBP50607 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TUBP50607 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBP50607 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.95■□□□□ 0.3
TUBP50607 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.95■□□□□ 0.3
TUBP50607 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TUBP50607 MTND6P24-201ENST00000440466 518 ntBASIC16.95■□□□□ 0.3
TUBP50607 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.95■□□□□ 0.3
TUBP50607 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBP50607 AL079307.3-201ENST00000556114 283 ntBASIC16.95■□□□□ 0.3
TUBP50607 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.95■□□□□ 0.3
TUBP50607 MIR4321-201ENST00000592276 80 ntBASIC16.95■□□□□ 0.3
TUBP50607 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TUBP50607 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
TUBP50607 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBP50607 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TUBP50607 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms