Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CX3CR1P49238 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CR1P49238 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.2□□□□□ -0.14
CX3CR1P49238 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.2□□□□□ -0.14
CX3CR1P49238 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CR1P49238 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CR1P49238 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CR1P49238 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CX3CR1P49238 AC002056.1-201ENST00000395613 760 ntBASIC14.2□□□□□ -0.14
CX3CR1P49238 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.2□□□□□ -0.14
CX3CR1P49238 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.2□□□□□ -0.14
CX3CR1P49238 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.2□□□□□ -0.14
CX3CR1P49238 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CX3CR1P49238 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.2□□□□□ -0.14
CX3CR1P49238 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CR1P49238 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CR1P49238 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.2□□□□□ -0.14
CX3CR1P49238 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.2□□□□□ -0.14
CX3CR1P49238 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CR1P49238 AL513190.1-201ENST00000621254 727 ntBASIC14.2□□□□□ -0.14
CX3CR1P49238 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.2□□□□□ -0.14
CX3CR1P49238 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CX3CR1P49238 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
CX3CR1P49238 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CX3CR1P49238 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CR1P49238 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CX3CR1P49238 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CR1P49238 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CX3CR1P49238 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CR1P49238 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CR1P49238 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CR1P49238 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.2□□□□□ -0.14
CX3CR1P49238 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CR1P49238 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.2□□□□□ -0.14
CX3CR1P49238 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CR1P49238 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.2□□□□□ -0.14
CX3CR1P49238 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CR1P49238 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CR1P49238 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.2□□□□□ -0.14
CX3CR1P49238 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.2□□□□□ -0.14
CX3CR1P49238 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CR1P49238 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CR1P49238 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CX3CR1P49238 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CX3CR1P49238 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CX3CR1P49238 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.19□□□□□ -0.14
CX3CR1P49238 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CX3CR1P49238 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 MED15P5-201ENST00000423150 992 ntBASIC14.19□□□□□ -0.14
CX3CR1P49238 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.19□□□□□ -0.14
CX3CR1P49238 FDX1P1-201ENST00000449115 551 ntBASIC14.19□□□□□ -0.14
CX3CR1P49238 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.19□□□□□ -0.14
CX3CR1P49238 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.19□□□□□ -0.14
CX3CR1P49238 AC112191.1-201ENST00000523689 701 ntBASIC14.19□□□□□ -0.14
CX3CR1P49238 SLC25A1P1-201ENST00000528351 927 ntBASIC14.19□□□□□ -0.14
CX3CR1P49238 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.19□□□□□ -0.14
CX3CR1P49238 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.19□□□□□ -0.14
CX3CR1P49238 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.19□□□□□ -0.14
CX3CR1P49238 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.19□□□□□ -0.14
CX3CR1P49238 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 AL589702.1-201ENST00000641229 1509 ntBASIC14.19□□□□□ -0.14
CX3CR1P49238 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CX3CR1P49238 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 AP003680.1-201ENST00000598970 3660 ntBASIC14.19□□□□□ -0.14
CX3CR1P49238 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CX3CR1P49238 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CR1P49238 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CX3CR1P49238 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.19□□□□□ -0.14
CX3CR1P49238 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.18□□□□□ -0.14
CX3CR1P49238 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.18□□□□□ -0.14
CX3CR1P49238 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.18□□□□□ -0.14
CX3CR1P49238 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.18□□□□□ -0.14
CX3CR1P49238 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CX3CR1P49238 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CR1P49238 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.18□□□□□ -0.14
CX3CR1P49238 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CR1P49238 AC008677.1-201ENST00000519230 1561 ntBASIC14.18□□□□□ -0.14
CX3CR1P49238 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CR1P49238 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.18□□□□□ -0.14
CX3CR1P49238 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.18□□□□□ -0.14
CX3CR1P49238 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms