Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC9A3P48764 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
SLC9A3P48764 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SLC9A3P48764 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC9A3P48764 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC9A3P48764 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.83□□□□□ -0.03
SLC9A3P48764 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SLC9A3P48764 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
SLC9A3P48764 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SLC9A3P48764 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.83□□□□□ -0.03
SLC9A3P48764 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.83□□□□□ -0.03
SLC9A3P48764 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
SLC9A3P48764 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.03
SLC9A3P48764 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SLC9A3P48764 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SLC9A3P48764 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.83□□□□□ -0.03
SLC9A3P48764 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
SLC9A3P48764 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.83□□□□□ -0.03
SLC9A3P48764 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
SLC9A3P48764 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.83□□□□□ -0.03
SLC9A3P48764 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.04
SLC9A3P48764 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.04
SLC9A3P48764 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC9A3P48764 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC9A3P48764 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC9A3P48764 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC9A3P48764 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC9A3P48764 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.83□□□□□ -0.04
SLC9A3P48764 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC9A3P48764 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SLC9A3P48764 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC9A3P48764 CRYGEP-201ENST00000412192 528 ntBASIC14.83□□□□□ -0.04
SLC9A3P48764 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC9A3P48764 AC098831.1-202ENST00000438821 336 ntBASIC14.83□□□□□ -0.04
SLC9A3P48764 AC093909.1-201ENST00000504731 1122 ntBASIC14.83□□□□□ -0.04
SLC9A3P48764 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.83□□□□□ -0.04
SLC9A3P48764 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC9A3P48764 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
SLC9A3P48764 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.83□□□□□ -0.04
SLC9A3P48764 AC109635.5-201ENST00000533593 962 ntBASIC14.83□□□□□ -0.04
SLC9A3P48764 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.83□□□□□ -0.04
SLC9A3P48764 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC9A3P48764 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC9A3P48764 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SLC9A3P48764 RN7SL510P-201ENST00000581311 263 ntBASIC14.83□□□□□ -0.04
SLC9A3P48764 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SLC9A3P48764 AL049840.3-201ENST00000602669 611 ntBASIC14.83□□□□□ -0.04
SLC9A3P48764 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC9A3P48764 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC9A3P48764 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC9A3P48764 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SLC9A3P48764 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC9A3P48764 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC9A3P48764 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.83□□□□□ -0.04
SLC9A3P48764 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC9A3P48764 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC9A3P48764 AC069224.1-201ENST00000566372 1715 ntBASIC14.83□□□□□ -0.04
SLC9A3P48764 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC9A3P48764 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC9A3P48764 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC9A3P48764 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC9A3P48764 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC9A3P48764 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC9A3P48764 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC9A3P48764 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC9A3P48764 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC9A3P48764 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC9A3P48764 AC112504.1-201ENST00000623415 1841 ntBASIC14.82□□□□□ -0.04
SLC9A3P48764 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SLC9A3P48764 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC9A3P48764 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC9A3P48764 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC9A3P48764 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC9A3P48764 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SLC9A3P48764 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC9A3P48764 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC9A3P48764 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC9A3P48764 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC9A3P48764 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC9A3P48764 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC9A3P48764 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC9A3P48764 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC9A3P48764 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.82□□□□□ -0.04
SLC9A3P48764 UNC93B6-202ENST00000528242 690 ntBASIC14.82□□□□□ -0.04
SLC9A3P48764 AP002469.2-201ENST00000531724 424 ntBASIC14.82□□□□□ -0.04
SLC9A3P48764 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC9A3P48764 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
SLC9A3P48764 MIR7706-201ENST00000613747 67 ntBASIC14.82□□□□□ -0.04
SLC9A3P48764 AL031008.1-201ENST00000619963 541 ntBASIC14.82□□□□□ -0.04
SLC9A3P48764 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC9A3P48764 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC9A3P48764 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC9A3P48764 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC9A3P48764 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC9A3P48764 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC9A3P48764 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC9A3P48764 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SLC9A3P48764 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC9A3P48764 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC9A3P48764 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms