Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC006001.1-201ENST00000325130 474 ntBASIC15.84■□□□□ 0.13
CXCL12P48061 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.84■□□□□ 0.13
CXCL12P48061 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.84■□□□□ 0.13
CXCL12P48061 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.84■□□□□ 0.13
CXCL12P48061 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.84■□□□□ 0.13
CXCL12P48061 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.84■□□□□ 0.13
CXCL12P48061 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.84■□□□□ 0.13
CXCL12P48061 AC000095.1-201ENST00000603208 874 ntBASIC15.84■□□□□ 0.13
CXCL12P48061 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.84■□□□□ 0.13
CXCL12P48061 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.84■□□□□ 0.13
CXCL12P48061 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CXCL12P48061 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL12P48061 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL12P48061 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL12P48061 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL12P48061 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL12P48061 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL12P48061 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL12P48061 AC009053.2-201ENST00000563701 2365 ntBASIC15.84■□□□□ 0.13
CXCL12P48061 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.84■□□□□ 0.13
CXCL12P48061 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL12P48061 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL12P48061 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL12P48061 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.84■□□□□ 0.13
CXCL12P48061 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL12P48061 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CXCL12P48061 NEFHP1-201ENST00000412845 2629 ntBASIC15.83■□□□□ 0.13
CXCL12P48061 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
CXCL12P48061 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CXCL12P48061 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.13
CXCL12P48061 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CXCL12P48061 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CXCL12P48061 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.83■□□□□ 0.12
CXCL12P48061 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.83■□□□□ 0.12
CXCL12P48061 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL12P48061 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CXCL12P48061 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL12P48061 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.83■□□□□ 0.12
CXCL12P48061 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
CXCL12P48061 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.83■□□□□ 0.12
CXCL12P48061 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.83■□□□□ 0.12
CXCL12P48061 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.83■□□□□ 0.12
CXCL12P48061 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL12P48061 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.83■□□□□ 0.12
CXCL12P48061 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.83■□□□□ 0.12
CXCL12P48061 AC026410.3-201ENST00000514280 936 ntBASIC15.83■□□□□ 0.12
CXCL12P48061 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL12P48061 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.83■□□□□ 0.12
CXCL12P48061 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.83■□□□□ 0.12
CXCL12P48061 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CXCL12P48061 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.83■□□□□ 0.12
CXCL12P48061 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.83■□□□□ 0.12
CXCL12P48061 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL12P48061 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.83■□□□□ 0.12
CXCL12P48061 AL021578.1-201ENST00000613646 709 ntBASIC15.83■□□□□ 0.12
CXCL12P48061 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.83■□□□□ 0.12
CXCL12P48061 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CXCL12P48061 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CXCL12P48061 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
CXCL12P48061 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL12P48061 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL12P48061 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL12P48061 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL12P48061 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.83■□□□□ 0.12
CXCL12P48061 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL12P48061 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL12P48061 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL12P48061 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CXCL12P48061 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CXCL12P48061 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.82■□□□□ 0.12
CXCL12P48061 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL12P48061 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL12P48061 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.82■□□□□ 0.12
CXCL12P48061 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL12P48061 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL12P48061 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL12P48061 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL12P48061 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.82■□□□□ 0.12
CXCL12P48061 AKR7A2P1-201ENST00000460134 915 ntBASIC15.82■□□□□ 0.12
CXCL12P48061 KRT18P43-201ENST00000469825 1281 ntBASIC15.82■□□□□ 0.12
CXCL12P48061 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.82■□□□□ 0.12
CXCL12P48061 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL12P48061 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.82■□□□□ 0.12
CXCL12P48061 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.82■□□□□ 0.12
CXCL12P48061 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.82■□□□□ 0.12
CXCL12P48061 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CXCL12P48061 AL450472.2-201ENST00000603663 1156 ntBASIC15.82■□□□□ 0.12
CXCL12P48061 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.82■□□□□ 0.12
CXCL12P48061 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.82■□□□□ 0.12
CXCL12P48061 AL008638.5-201ENST00000623814 1298 ntBASIC15.82■□□□□ 0.12
CXCL12P48061 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.82■□□□□ 0.12
CXCL12P48061 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL12P48061 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL12P48061 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.82■□□□□ 0.12
CXCL12P48061 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL12P48061 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.82■□□□□ 0.12
CXCL12P48061 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.82■□□□□ 0.12
CXCL12P48061 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL12P48061 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CXCL12P48061 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms