Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.62■□□□□ 0.41
USP8P40818 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.62■□□□□ 0.41
USP8P40818 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.62■□□□□ 0.41
USP8P40818 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP8P40818 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP8P40818 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP8P40818 AL022342.1-201ENST00000400363 863 ntBASIC17.62■□□□□ 0.41
USP8P40818 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.62■□□□□ 0.41
USP8P40818 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.62■□□□□ 0.41
USP8P40818 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP8P40818 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
USP8P40818 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP8P40818 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.62■□□□□ 0.41
USP8P40818 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
USP8P40818 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP8P40818 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP8P40818 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
USP8P40818 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP8P40818 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
USP8P40818 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP8P40818 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP8P40818 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP8P40818 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.62■□□□□ 0.41
USP8P40818 SBF1P1-201ENST00000444527 5631 ntBASIC17.62■□□□□ 0.41
USP8P40818 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP8P40818 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.62■□□□□ 0.41
USP8P40818 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP8P40818 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
USP8P40818 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.62■□□□□ 0.41
USP8P40818 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
USP8P40818 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
USP8P40818 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
USP8P40818 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.61■□□□□ 0.41
USP8P40818 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.61■□□□□ 0.41
USP8P40818 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
USP8P40818 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
USP8P40818 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
USP8P40818 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
USP8P40818 AC010491.1-201ENST00000563101 2797 ntBASIC17.61■□□□□ 0.41
USP8P40818 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.61■□□□□ 0.41
USP8P40818 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
USP8P40818 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.61■□□□□ 0.41
USP8P40818 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.61■□□□□ 0.41
USP8P40818 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.61■□□□□ 0.41
USP8P40818 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
USP8P40818 POLD2P1-201ENST00000511220 997 ntBASIC17.61■□□□□ 0.41
USP8P40818 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.61■□□□□ 0.41
USP8P40818 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
USP8P40818 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
USP8P40818 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.61■□□□□ 0.41
USP8P40818 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.61■□□□□ 0.41
USP8P40818 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.61■□□□□ 0.41
USP8P40818 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
USP8P40818 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.61■□□□□ 0.41
USP8P40818 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
USP8P40818 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.61■□□□□ 0.41
USP8P40818 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
USP8P40818 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP8P40818 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
USP8P40818 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.61■□□□□ 0.41
USP8P40818 U82695.1-201ENST00000635752 1889 ntBASIC17.61■□□□□ 0.41
USP8P40818 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP8P40818 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP8P40818 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
USP8P40818 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.6■□□□□ 0.41
USP8P40818 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP8P40818 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.6■□□□□ 0.41
USP8P40818 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.6■□□□□ 0.41
USP8P40818 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP8P40818 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP8P40818 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP8P40818 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
USP8P40818 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
USP8P40818 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.6■□□□□ 0.41
USP8P40818 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP8P40818 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms