Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTGFP29279 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CTGFP29279 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CTGFP29279 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTGFP29279 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.81■□□□□ 0.44
CTGFP29279 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.81■□□□□ 0.44
CTGFP29279 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTGFP29279 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTGFP29279 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.8■□□□□ 0.44
CTGFP29279 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.8■□□□□ 0.44
CTGFP29279 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.8■□□□□ 0.44
CTGFP29279 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.8■□□□□ 0.44
CTGFP29279 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTGFP29279 AC005052.1-201ENST00000625181 2492 ntBASIC17.8■□□□□ 0.44
CTGFP29279 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTGFP29279 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTGFP29279 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.8■□□□□ 0.44
CTGFP29279 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTGFP29279 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTGFP29279 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTGFP29279 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTGFP29279 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTGFP29279 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTGFP29279 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTGFP29279 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.8■□□□□ 0.44
CTGFP29279 CD8B2-202ENST00000417670 633 ntBASIC17.8■□□□□ 0.44
CTGFP29279 POM121L10P-201ENST00000436994 1285 ntBASIC17.8■□□□□ 0.44
CTGFP29279 SPTLC1P5-201ENST00000450718 252 ntBASIC17.8■□□□□ 0.44
CTGFP29279 TMEM198B-204ENST00000484016 896 ntBASIC17.8■□□□□ 0.44
CTGFP29279 FTLP10-202ENST00000505798 471 ntBASIC17.8■□□□□ 0.44
CTGFP29279 AC126915.1-201ENST00000522847 1038 ntBASIC17.8■□□□□ 0.44
CTGFP29279 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.8■□□□□ 0.44
CTGFP29279 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.8■□□□□ 0.44
CTGFP29279 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTGFP29279 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTGFP29279 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTGFP29279 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTGFP29279 AL023775.1-201ENST00000454907 1746 ntBASIC17.8■□□□□ 0.44
CTGFP29279 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTGFP29279 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTGFP29279 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTGFP29279 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CTGFP29279 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTGFP29279 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTGFP29279 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTGFP29279 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTGFP29279 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTGFP29279 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTGFP29279 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTGFP29279 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.79■□□□□ 0.44
CTGFP29279 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTGFP29279 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.79■□□□□ 0.44
CTGFP29279 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.79■□□□□ 0.44
CTGFP29279 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CTGFP29279 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTGFP29279 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTGFP29279 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTGFP29279 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CTGFP29279 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTGFP29279 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.79■□□□□ 0.44
CTGFP29279 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.79■□□□□ 0.44
CTGFP29279 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.79■□□□□ 0.44
CTGFP29279 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CTGFP29279 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTGFP29279 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CTGFP29279 AC044849.1-201ENST00000519737 1188 ntBASIC17.79■□□□□ 0.44
CTGFP29279 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.79■□□□□ 0.44
CTGFP29279 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.79■□□□□ 0.44
CTGFP29279 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.79■□□□□ 0.44
CTGFP29279 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTGFP29279 AP001282.1-201ENST00000531301 1499 ntBASIC17.79■□□□□ 0.44
CTGFP29279 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTGFP29279 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.79■□□□□ 0.44
CTGFP29279 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.79■□□□□ 0.44
CTGFP29279 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CTGFP29279 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CTGFP29279 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CTGFP29279 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.79■□□□□ 0.44
CTGFP29279 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTGFP29279 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTGFP29279 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
CTGFP29279 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTGFP29279 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.78■□□□□ 0.44
CTGFP29279 AL138799.1-201ENST00000448213 1675 ntBASIC17.78■□□□□ 0.44
CTGFP29279 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTGFP29279 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTGFP29279 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CTGFP29279 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTGFP29279 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTGFP29279 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTGFP29279 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTGFP29279 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.78■□□□□ 0.44
CTGFP29279 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.78■□□□□ 0.44
CTGFP29279 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.78■□□□□ 0.44
CTGFP29279 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.78■□□□□ 0.44
CTGFP29279 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.78■□□□□ 0.44
CTGFP29279 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.78■□□□□ 0.44
CTGFP29279 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.78■□□□□ 0.44
CTGFP29279 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CTGFP29279 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms