Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NR4A1P22736 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
NR4A1P22736 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NR4A1P22736 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
NR4A1P22736 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
NR4A1P22736 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.05■□□□□ 0
NR4A1P22736 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.05■□□□□ 0
NR4A1P22736 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ 0
NR4A1P22736 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NR4A1P22736 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.05■□□□□ -0
NR4A1P22736 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
NR4A1P22736 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NR4A1P22736 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.05■□□□□ -0
NR4A1P22736 AL031284.1-201ENST00000419297 478 ntBASIC15.05■□□□□ -0
NR4A1P22736 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.05■□□□□ -0
NR4A1P22736 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.05■□□□□ -0
NR4A1P22736 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.05■□□□□ -0
NR4A1P22736 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.05■□□□□ -0
NR4A1P22736 AP001005.1-201ENST00000571755 1248 ntBASIC15.05■□□□□ -0
NR4A1P22736 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.05■□□□□ -0
NR4A1P22736 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.05■□□□□ -0
NR4A1P22736 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.05■□□□□ -0
NR4A1P22736 AC025062.2-201ENST00000605477 670 ntBASIC15.05■□□□□ -0
NR4A1P22736 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.05■□□□□ -0
NR4A1P22736 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.05■□□□□ -0
NR4A1P22736 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.05■□□□□ -0
NR4A1P22736 HLA-A-201ENST00000376802 1334 ntBASIC15.05■□□□□ -0
NR4A1P22736 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.05■□□□□ -0
NR4A1P22736 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
NR4A1P22736 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NR4A1P22736 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
NR4A1P22736 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.05■□□□□ -0
NR4A1P22736 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.05■□□□□ -0
NR4A1P22736 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
NR4A1P22736 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.05■□□□□ -0
NR4A1P22736 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.05■□□□□ -0
NR4A1P22736 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.05■□□□□ -0
NR4A1P22736 AC004817.3-201ENST00000602957 2129 ntBASIC15.05■□□□□ -0
NR4A1P22736 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NR4A1P22736 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NR4A1P22736 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
NR4A1P22736 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.05■□□□□ -0
NR4A1P22736 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
NR4A1P22736 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NR4A1P22736 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NR4A1P22736 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
NR4A1P22736 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NR4A1P22736 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NR4A1P22736 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NR4A1P22736 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.04■□□□□ -0
NR4A1P22736 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.04■□□□□ -0
NR4A1P22736 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.04■□□□□ -0
NR4A1P22736 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 REXO1L8P-201ENST00000604378 1897 ntBASIC15.04■□□□□ -0
NR4A1P22736 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
NR4A1P22736 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 AC148477.5-201ENST00000625164 1645 ntBASIC15.04■□□□□ -0
NR4A1P22736 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
NR4A1P22736 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.04■□□□□ -0
NR4A1P22736 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 RPS2P1-201ENST00000434010 821 ntBASIC15.04■□□□□ -0
NR4A1P22736 HNRNPDP1-201ENST00000439535 754 ntBASIC15.04■□□□□ -0
NR4A1P22736 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
NR4A1P22736 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.04■□□□□ -0
NR4A1P22736 OR7E14P-202ENST00000530490 1290 ntBASIC15.04■□□□□ -0
NR4A1P22736 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.04■□□□□ -0
NR4A1P22736 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NR4A1P22736 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.04■□□□□ -0
NR4A1P22736 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
NR4A1P22736 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NR4A1P22736 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NR4A1P22736 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
NR4A1P22736 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.04■□□□□ -0
NR4A1P22736 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.04■□□□□ -0
NR4A1P22736 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.04■□□□□ -0
NR4A1P22736 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.04■□□□□ -0
NR4A1P22736 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
NR4A1P22736 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.04■□□□□ -0
NR4A1P22736 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms