Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ERCC2P18074 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC2P18074 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.54■□□□□ 0.24
ERCC2P18074 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC2P18074 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.54■□□□□ 0.24
ERCC2P18074 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC2P18074 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC2P18074 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
ERCC2P18074 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC2P18074 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.54■□□□□ 0.24
ERCC2P18074 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.54■□□□□ 0.24
ERCC2P18074 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC2P18074 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
ERCC2P18074 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.54■□□□□ 0.24
ERCC2P18074 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.54■□□□□ 0.24
ERCC2P18074 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.54■□□□□ 0.24
ERCC2P18074 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.54■□□□□ 0.24
ERCC2P18074 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.54■□□□□ 0.24
ERCC2P18074 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.54■□□□□ 0.24
ERCC2P18074 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.54■□□□□ 0.24
ERCC2P18074 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.54■□□□□ 0.24
ERCC2P18074 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC2P18074 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC2P18074 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.54■□□□□ 0.24
ERCC2P18074 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC2P18074 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC2P18074 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.54■□□□□ 0.24
ERCC2P18074 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.54■□□□□ 0.24
ERCC2P18074 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC2P18074 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC2P18074 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC2P18074 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC2P18074 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC2P18074 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.53■□□□□ 0.24
ERCC2P18074 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.53■□□□□ 0.24
ERCC2P18074 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC2P18074 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC2P18074 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC2P18074 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC2P18074 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ERCC2P18074 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC2P18074 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.53■□□□□ 0.24
ERCC2P18074 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ERCC2P18074 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC2P18074 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC2P18074 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC2P18074 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC2P18074 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC2P18074 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC2P18074 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC2P18074 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ERCC2P18074 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC2P18074 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC2P18074 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.53■□□□□ 0.24
ERCC2P18074 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.53■□□□□ 0.24
ERCC2P18074 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC2P18074 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC2P18074 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC2P18074 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
ERCC2P18074 RN7SL828P-201ENST00000607615 303 ntBASIC16.53■□□□□ 0.24
ERCC2P18074 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC2P18074 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC2P18074 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ERCC2P18074 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ERCC2P18074 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC2P18074 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.53■□□□□ 0.24
ERCC2P18074 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC2P18074 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC2P18074 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.53■□□□□ 0.24
ERCC2P18074 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.53■□□□□ 0.24
ERCC2P18074 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC2P18074 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC2P18074 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC2P18074 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC2P18074 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.53■□□□□ 0.24
ERCC2P18074 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC2P18074 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC2P18074 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC2P18074 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
ERCC2P18074 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC2P18074 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.52■□□□□ 0.24
ERCC2P18074 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC2P18074 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.52■□□□□ 0.24
ERCC2P18074 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC2P18074 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.52■□□□□ 0.24
ERCC2P18074 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC2P18074 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC2P18074 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC2P18074 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC2P18074 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.52■□□□□ 0.24
ERCC2P18074 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.52■□□□□ 0.24
ERCC2P18074 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC2P18074 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC2P18074 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.52■□□□□ 0.24
ERCC2P18074 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.52■□□□□ 0.24
ERCC2P18074 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.52■□□□□ 0.24
ERCC2P18074 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.52■□□□□ 0.24
ERCC2P18074 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.52■□□□□ 0.24
ERCC2P18074 AC004449.1-201ENST00000564240 433 ntBASIC16.52■□□□□ 0.24
ERCC2P18074 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms