Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTPS1P17812 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.18■□□□□ 0.18
CTPS1P17812 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
CTPS1P17812 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTPS1P17812 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.18■□□□□ 0.18
CTPS1P17812 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTPS1P17812 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
CTPS1P17812 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.18■□□□□ 0.18
CTPS1P17812 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTPS1P17812 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTPS1P17812 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTPS1P17812 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.18■□□□□ 0.18
CTPS1P17812 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTPS1P17812 AC026691.1-201ENST00000602502 2017 ntBASIC16.18■□□□□ 0.18
CTPS1P17812 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTPS1P17812 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTPS1P17812 CYP4F24P-201ENST00000586049 1580 ntBASIC16.17■□□□□ 0.18
CTPS1P17812 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTPS1P17812 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTPS1P17812 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CTPS1P17812 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTPS1P17812 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CTPS1P17812 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CTPS1P17812 AL139384.1-201ENST00000612143 3047 ntBASIC16.17■□□□□ 0.18
CTPS1P17812 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTPS1P17812 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.17■□□□□ 0.18
CTPS1P17812 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTPS1P17812 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.17■□□□□ 0.18
CTPS1P17812 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.17■□□□□ 0.18
CTPS1P17812 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTPS1P17812 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTPS1P17812 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.17■□□□□ 0.18
CTPS1P17812 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTPS1P17812 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTPS1P17812 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CTPS1P17812 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CTPS1P17812 AC097493.3-201ENST00000509725 367 ntBASIC16.17■□□□□ 0.18
CTPS1P17812 AC027369.6-201ENST00000525520 931 ntBASIC16.17■□□□□ 0.18
CTPS1P17812 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.17■□□□□ 0.18
CTPS1P17812 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.17■□□□□ 0.18
CTPS1P17812 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CTPS1P17812 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.17■□□□□ 0.18
CTPS1P17812 AL390955.2-201ENST00000603032 514 ntBASIC16.17■□□□□ 0.18
CTPS1P17812 AL138828.2-201ENST00000615812 383 ntBASIC16.17■□□□□ 0.18
CTPS1P17812 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CTPS1P17812 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.17■□□□□ 0.18
CTPS1P17812 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.17■□□□□ 0.18
CTPS1P17812 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.17■□□□□ 0.18
CTPS1P17812 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTPS1P17812 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTPS1P17812 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CTPS1P17812 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.17■□□□□ 0.18
CTPS1P17812 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTPS1P17812 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.17■□□□□ 0.18
CTPS1P17812 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.17■□□□□ 0.18
CTPS1P17812 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CTPS1P17812 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.17■□□□□ 0.18
CTPS1P17812 CETN4P-206ENST00000642099 2168 ntBASIC16.17■□□□□ 0.18
CTPS1P17812 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTPS1P17812 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.17■□□□□ 0.18
CTPS1P17812 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTPS1P17812 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTPS1P17812 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.17■□□□□ 0.18
CTPS1P17812 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CTPS1P17812 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.17■□□□□ 0.18
CTPS1P17812 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTPS1P17812 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTPS1P17812 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTPS1P17812 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CTPS1P17812 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTPS1P17812 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTPS1P17812 AL513523.2-202ENST00000427283 2040 ntBASIC16.16■□□□□ 0.18
CTPS1P17812 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.16■□□□□ 0.18
CTPS1P17812 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
CTPS1P17812 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTPS1P17812 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTPS1P17812 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTPS1P17812 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTPS1P17812 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CTPS1P17812 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTPS1P17812 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTPS1P17812 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.16■□□□□ 0.18
CTPS1P17812 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CTPS1P17812 RPL37AP1-201ENST00000412502 279 ntBASIC16.16■□□□□ 0.18
CTPS1P17812 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.16■□□□□ 0.18
CTPS1P17812 AC092580.3-201ENST00000430932 139 ntBASIC16.16■□□□□ 0.18
CTPS1P17812 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.16■□□□□ 0.18
CTPS1P17812 AL079307.3-201ENST00000556114 283 ntBASIC16.16■□□□□ 0.18
CTPS1P17812 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.16■□□□□ 0.18
CTPS1P17812 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.16■□□□□ 0.18
CTPS1P17812 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.16■□□□□ 0.18
CTPS1P17812 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.16■□□□□ 0.18
CTPS1P17812 AC005498.2-205ENST00000593218 784 ntBASIC16.16■□□□□ 0.18
CTPS1P17812 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CTPS1P17812 AC073592.8-201ENST00000624126 511 ntBASIC16.16■□□□□ 0.18
CTPS1P17812 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.16■□□□□ 0.18
CTPS1P17812 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTPS1P17812 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTPS1P17812 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTPS1P17812 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms