Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 PMS2P1-201ENST00000431037 1228 ntBASIC13.17□□□□□ -0.3
DEFA4P12838 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.17□□□□□ -0.3
DEFA4P12838 HNRNPDP1-201ENST00000439535 754 ntBASIC13.17□□□□□ -0.3
DEFA4P12838 AC079781.3-201ENST00000449110 356 ntBASIC13.17□□□□□ -0.3
DEFA4P12838 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.17□□□□□ -0.3
DEFA4P12838 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.17□□□□□ -0.3
DEFA4P12838 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.17□□□□□ -0.3
DEFA4P12838 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.17□□□□□ -0.3
DEFA4P12838 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
DEFA4P12838 MIR4492-201ENST00000581627 80 ntBASIC13.17□□□□□ -0.3
DEFA4P12838 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.17□□□□□ -0.3
DEFA4P12838 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.17□□□□□ -0.3
DEFA4P12838 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.17□□□□□ -0.3
DEFA4P12838 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
DEFA4P12838 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
DEFA4P12838 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA4P12838 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA4P12838 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA4P12838 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA4P12838 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
DEFA4P12838 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA4P12838 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA4P12838 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.17□□□□□ -0.3
DEFA4P12838 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA4P12838 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA4P12838 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA4P12838 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
DEFA4P12838 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
DEFA4P12838 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA4P12838 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA4P12838 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.17□□□□□ -0.3
DEFA4P12838 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.16□□□□□ -0.3
DEFA4P12838 GGT4P-201ENST00000623672 1708 ntBASIC13.16□□□□□ -0.3
DEFA4P12838 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.16□□□□□ -0.3
DEFA4P12838 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
DEFA4P12838 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
DEFA4P12838 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.16□□□□□ -0.3
DEFA4P12838 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.16□□□□□ -0.3
DEFA4P12838 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.16□□□□□ -0.3
DEFA4P12838 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
DEFA4P12838 TPM4P1-201ENST00000436100 807 ntBASIC13.16□□□□□ -0.3
DEFA4P12838 AC108073.2-201ENST00000464002 357 ntBASIC13.16□□□□□ -0.3
DEFA4P12838 AC107918.2-201ENST00000530817 355 ntBASIC13.16□□□□□ -0.3
DEFA4P12838 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.16□□□□□ -0.3
DEFA4P12838 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
DEFA4P12838 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.16□□□□□ -0.3
DEFA4P12838 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.16□□□□□ -0.3
DEFA4P12838 AC004790.2-201ENST00000623588 572 ntBASIC13.16□□□□□ -0.3
DEFA4P12838 FAM215A-202ENST00000632077 792 ntBASIC13.16□□□□□ -0.3
DEFA4P12838 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.16□□□□□ -0.3
DEFA4P12838 AC012569.1-201ENST00000591191 1524 ntBASIC13.16□□□□□ -0.3
DEFA4P12838 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 AC006449.6-201ENST00000612330 2296 ntBASIC13.16□□□□□ -0.3
DEFA4P12838 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.16□□□□□ -0.3
DEFA4P12838 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
DEFA4P12838 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
DEFA4P12838 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
DEFA4P12838 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
DEFA4P12838 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
DEFA4P12838 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.16□□□□□ -0.3
DEFA4P12838 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.15□□□□□ -0.3
DEFA4P12838 SLC22A20-204ENST00000530038 1673 ntBASIC13.15□□□□□ -0.3
DEFA4P12838 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DEFA4P12838 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.15□□□□□ -0.3
DEFA4P12838 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.15□□□□□ -0.3
DEFA4P12838 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DEFA4P12838 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.15□□□□□ -0.3
DEFA4P12838 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.15□□□□□ -0.3
DEFA4P12838 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.15□□□□□ -0.3
DEFA4P12838 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DEFA4P12838 OR2I1P-210ENST00000642037 4691 ntBASIC13.15□□□□□ -0.3
DEFA4P12838 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.15□□□□□ -0.3
DEFA4P12838 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms