Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HOXC6P09630 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC6P09630 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC6P09630 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC6P09630 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC6P09630 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC6P09630 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HOXC6P09630 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.01■□□□□ 0.47
HOXC6P09630 C1QBPP1-201ENST00000400117 770 ntBASIC18.01■□□□□ 0.47
HOXC6P09630 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC6P09630 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.01■□□□□ 0.47
HOXC6P09630 KRT18P64-201ENST00000434946 1219 ntBASIC18.01■□□□□ 0.47
HOXC6P09630 AC012441.1-201ENST00000446669 685 ntBASIC18.01■□□□□ 0.47
HOXC6P09630 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
HOXC6P09630 AC108725.1-201ENST00000495472 409 ntBASIC18.01■□□□□ 0.47
HOXC6P09630 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC6P09630 SLED1-202ENST00000512051 380 ntBASIC18.01■□□□□ 0.47
HOXC6P09630 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.01■□□□□ 0.47
HOXC6P09630 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.01■□□□□ 0.47
HOXC6P09630 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.01■□□□□ 0.47
HOXC6P09630 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.01■□□□□ 0.47
HOXC6P09630 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.01■□□□□ 0.47
HOXC6P09630 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.01■□□□□ 0.47
HOXC6P09630 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.01■□□□□ 0.47
HOXC6P09630 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC6P09630 AL049840.4-201ENST00000602422 811 ntBASIC18.01■□□□□ 0.47
HOXC6P09630 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.01■□□□□ 0.47
HOXC6P09630 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC6P09630 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC6P09630 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC6P09630 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC6P09630 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
HOXC6P09630 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC6P09630 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.01■□□□□ 0.47
HOXC6P09630 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC6P09630 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.01■□□□□ 0.47
HOXC6P09630 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC6P09630 AC011676.5-201ENST00000624864 2660 ntBASIC18.01■□□□□ 0.47
HOXC6P09630 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC6P09630 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HOXC6P09630 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC6P09630 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC6P09630 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.01■□□□□ 0.47
HOXC6P09630 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.01■□□□□ 0.47
HOXC6P09630 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC6P09630 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
HOXC6P09630 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18■□□□□ 0.47
HOXC6P09630 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18■□□□□ 0.47
HOXC6P09630 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HOXC6P09630 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18■□□□□ 0.47
HOXC6P09630 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18■□□□□ 0.47
HOXC6P09630 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18■□□□□ 0.47
HOXC6P09630 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC6P09630 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
HOXC6P09630 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18■□□□□ 0.47
HOXC6P09630 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC6P09630 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC6P09630 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
HOXC6P09630 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18■□□□□ 0.47
HOXC6P09630 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18■□□□□ 0.47
HOXC6P09630 AC079316.1-201ENST00000548397 411 ntBASIC18■□□□□ 0.47
HOXC6P09630 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18■□□□□ 0.47
HOXC6P09630 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18■□□□□ 0.47
HOXC6P09630 AP001063.1-201ENST00000568332 529 ntBASIC18■□□□□ 0.47
HOXC6P09630 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HOXC6P09630 AC103810.3-201ENST00000583567 96 ntBASIC18■□□□□ 0.47
HOXC6P09630 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18■□□□□ 0.47
HOXC6P09630 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
HOXC6P09630 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18■□□□□ 0.47
HOXC6P09630 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
HOXC6P09630 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC6P09630 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18■□□□□ 0.47
HOXC6P09630 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC6P09630 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18■□□□□ 0.47
HOXC6P09630 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC6P09630 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC6P09630 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18■□□□□ 0.47
HOXC6P09630 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
HOXC6P09630 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC6P09630 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.99■□□□□ 0.47
HOXC6P09630 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.99■□□□□ 0.47
HOXC6P09630 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC6P09630 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC6P09630 UBALD1-205ENST00000590891 2641 ntBASIC17.99■□□□□ 0.47
HOXC6P09630 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC6P09630 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.99■□□□□ 0.47
HOXC6P09630 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC6P09630 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC6P09630 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.99■□□□□ 0.47
HOXC6P09630 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.99■□□□□ 0.47
HOXC6P09630 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
HOXC6P09630 AC136604.1-201ENST00000418535 575 ntBASIC17.99■□□□□ 0.47
HOXC6P09630 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.99■□□□□ 0.47
HOXC6P09630 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.99■□□□□ 0.47
HOXC6P09630 FTH1P14-201ENST00000482930 551 ntBASIC17.99■□□□□ 0.47
HOXC6P09630 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC6P09630 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.99■□□□□ 0.47
HOXC6P09630 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.99■□□□□ 0.47
HOXC6P09630 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.99■□□□□ 0.47
HOXC6P09630 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms