Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
MMP2P08253 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
MMP2P08253 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.13■□□□□ 0.17
MMP2P08253 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.13■□□□□ 0.17
MMP2P08253 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.13■□□□□ 0.17
MMP2P08253 TEX28P1-201ENST00000613479 1221 ntBASIC16.13■□□□□ 0.17
MMP2P08253 TEX28P2-201ENST00000617764 1221 ntBASIC16.13■□□□□ 0.17
MMP2P08253 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP2P08253 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.13■□□□□ 0.17
MMP2P08253 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
MMP2P08253 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MMP2P08253 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP2P08253 CICP6-201ENST00000457191 2729 ntBASIC16.13■□□□□ 0.17
MMP2P08253 AC105917.1-201ENST00000506637 2539 ntBASIC16.13■□□□□ 0.17
MMP2P08253 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP2P08253 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
MMP2P08253 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.13■□□□□ 0.17
MMP2P08253 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP2P08253 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.13■□□□□ 0.17
MMP2P08253 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.13■□□□□ 0.17
MMP2P08253 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.13■□□□□ 0.17
MMP2P08253 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP2P08253 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP2P08253 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
MMP2P08253 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
MMP2P08253 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
MMP2P08253 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.12■□□□□ 0.17
MMP2P08253 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
MMP2P08253 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.12■□□□□ 0.17
MMP2P08253 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
MMP2P08253 FO393414.2-201ENST00000405153 598 ntBASIC16.12■□□□□ 0.17
MMP2P08253 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.12■□□□□ 0.17
MMP2P08253 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.12■□□□□ 0.17
MMP2P08253 TREML5P-201ENST00000421694 576 ntBASIC16.12■□□□□ 0.17
MMP2P08253 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.12■□□□□ 0.17
MMP2P08253 AL645939.2-201ENST00000427340 991 ntBASIC16.12■□□□□ 0.17
MMP2P08253 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.12■□□□□ 0.17
MMP2P08253 FAM86GP-201ENST00000448322 971 ntBASIC16.12■□□□□ 0.17
MMP2P08253 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.12■□□□□ 0.17
MMP2P08253 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.12■□□□□ 0.17
MMP2P08253 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.12■□□□□ 0.17
MMP2P08253 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.12■□□□□ 0.17
MMP2P08253 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.12■□□□□ 0.17
MMP2P08253 AC097493.3-201ENST00000509725 367 ntBASIC16.12■□□□□ 0.17
MMP2P08253 AC069120.2-201ENST00000524091 540 ntBASIC16.12■□□□□ 0.17
MMP2P08253 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.12■□□□□ 0.17
MMP2P08253 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.12■□□□□ 0.17
MMP2P08253 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.12■□□□□ 0.17
MMP2P08253 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.12■□□□□ 0.17
MMP2P08253 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.12■□□□□ 0.17
MMP2P08253 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
MMP2P08253 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP2P08253 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
MMP2P08253 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.12■□□□□ 0.17
MMP2P08253 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
MMP2P08253 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
MMP2P08253 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
MMP2P08253 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
MMP2P08253 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP2P08253 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP2P08253 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP2P08253 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MMP2P08253 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP2P08253 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP2P08253 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP2P08253 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP2P08253 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.11■□□□□ 0.17
MMP2P08253 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.11■□□□□ 0.17
MMP2P08253 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.11■□□□□ 0.17
MMP2P08253 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.11■□□□□ 0.17
MMP2P08253 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
MMP2P08253 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.11■□□□□ 0.17
MMP2P08253 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
MMP2P08253 AC073592.8-201ENST00000624126 511 ntBASIC16.11■□□□□ 0.17
MMP2P08253 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP2P08253 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
MMP2P08253 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms