Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 AF228730.7-201ENST00000641842 219 ntBASIC18.41■□□□□ 0.54
TPM2P07951 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM2P07951 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM2P07951 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM2P07951 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPM2P07951 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM2P07951 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM2P07951 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TPM2P07951 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TPM2P07951 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM2P07951 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM2P07951 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM2P07951 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TPM2P07951 AC010327.5-201ENST00000586923 3061 ntBASIC18.41■□□□□ 0.54
TPM2P07951 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TPM2P07951 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TPM2P07951 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC18.4■□□□□ 0.54
TPM2P07951 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM2P07951 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM2P07951 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
TPM2P07951 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC18.4■□□□□ 0.54
TPM2P07951 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TPM2P07951 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM2P07951 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM2P07951 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
TPM2P07951 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM2P07951 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM2P07951 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TPM2P07951 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.4■□□□□ 0.54
TPM2P07951 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM2P07951 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.4■□□□□ 0.54
TPM2P07951 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM2P07951 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.4■□□□□ 0.54
TPM2P07951 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TPM2P07951 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.4■□□□□ 0.54
TPM2P07951 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.4■□□□□ 0.54
TPM2P07951 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.4■□□□□ 0.54
TPM2P07951 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.4■□□□□ 0.54
TPM2P07951 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.4■□□□□ 0.54
TPM2P07951 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.4■□□□□ 0.54
TPM2P07951 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.4■□□□□ 0.54
TPM2P07951 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.4■□□□□ 0.54
TPM2P07951 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.4■□□□□ 0.54
TPM2P07951 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.4■□□□□ 0.54
TPM2P07951 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.4■□□□□ 0.54
TPM2P07951 OS9-207ENST00000439210 1946 ntTSL 2 BASIC18.4■□□□□ 0.54
TPM2P07951 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM2P07951 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TPM2P07951 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM2P07951 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM2P07951 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TPM2P07951 GGT3P-204ENST00000453783 1664 ntBASIC18.4■□□□□ 0.54
TPM2P07951 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TPM2P07951 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TPM2P07951 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM2P07951 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM2P07951 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TPM2P07951 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM2P07951 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TPM2P07951 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TPM2P07951 OR2I1P-210ENST00000642037 4691 ntBASIC18.4■□□□□ 0.54
TPM2P07951 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TPM2P07951 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TPM2P07951 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TPM2P07951 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC18.39■□□□□ 0.54
TPM2P07951 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TPM2P07951 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TPM2P07951 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC18.39■□□□□ 0.53
TPM2P07951 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
TPM2P07951 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.39■□□□□ 0.53
TPM2P07951 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM2P07951 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
TPM2P07951 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM2P07951 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TPM2P07951 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.39■□□□□ 0.53
TPM2P07951 SCARNA2-201ENST00000458748 420 ntBASIC18.39■□□□□ 0.53
TPM2P07951 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.39■□□□□ 0.53
TPM2P07951 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.39■□□□□ 0.53
TPM2P07951 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.39■□□□□ 0.53
TPM2P07951 AL732292.2-201ENST00000609649 430 ntBASIC18.39■□□□□ 0.53
TPM2P07951 AL121772.3-201ENST00000610840 674 ntBASIC18.39■□□□□ 0.53
TPM2P07951 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TPM2P07951 LINC00552-201ENST00000625151 2579 ntBASIC18.39■□□□□ 0.53
TPM2P07951 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TPM2P07951 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM2P07951 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TPM2P07951 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TPM2P07951 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.39■□□□□ 0.53
TPM2P07951 AC002310.6-201ENST00000624451 1377 ntBASIC18.39■□□□□ 0.53
TPM2P07951 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
TPM2P07951 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TPM2P07951 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM2P07951 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.39■□□□□ 0.53
TPM2P07951 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.39■□□□□ 0.53
TPM2P07951 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM2P07951 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TPM2P07951 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
TPM2P07951 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TPM2P07951 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TPM2P07951 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms