Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC20.74■□□□□ 0.91
COL5A2P05997 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC20.74■□□□□ 0.91
COL5A2P05997 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL5A2P05997 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.74■□□□□ 0.91
COL5A2P05997 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.74■□□□□ 0.91
COL5A2P05997 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
COL5A2P05997 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
COL5A2P05997 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.73■□□□□ 0.91
COL5A2P05997 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL5A2P05997 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.73■□□□□ 0.91
COL5A2P05997 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL5A2P05997 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC20.73■□□□□ 0.91
COL5A2P05997 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL5A2P05997 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
COL5A2P05997 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL5A2P05997 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
COL5A2P05997 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL5A2P05997 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL5A2P05997 AC091046.1-201ENST00000331871 207 ntBASIC20.73■□□□□ 0.91
COL5A2P05997 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL5A2P05997 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
COL5A2P05997 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC20.73■□□□□ 0.91
COL5A2P05997 MPV17-205ENST00000402310 906 ntTSL 5 BASIC20.73■□□□□ 0.91
COL5A2P05997 KLF2P2-201ENST00000416807 1039 ntBASIC20.73■□□□□ 0.91
COL5A2P05997 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC20.73■□□□□ 0.91
COL5A2P05997 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL5A2P05997 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL5A2P05997 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC20.73■□□□□ 0.91
COL5A2P05997 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
COL5A2P05997 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC20.73■□□□□ 0.91
COL5A2P05997 NKG7-204ENST00000595217 816 ntTSL 2 BASIC20.73■□□□□ 0.91
COL5A2P05997 AC097724.1-201ENST00000609581 426 ntBASIC20.73■□□□□ 0.91
COL5A2P05997 MIR6727-201ENST00000620702 65 ntBASIC20.73■□□□□ 0.91
COL5A2P05997 BX539320.1-201ENST00000623759 877 ntBASIC20.73■□□□□ 0.91
COL5A2P05997 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC20.73■□□□□ 0.91
COL5A2P05997 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL5A2P05997 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC20.73■□□□□ 0.91
COL5A2P05997 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC20.73■□□□□ 0.91
COL5A2P05997 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL5A2P05997 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL5A2P05997 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL5A2P05997 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
COL5A2P05997 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL5A2P05997 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL5A2P05997 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL5A2P05997 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL5A2P05997 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL5A2P05997 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL5A2P05997 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL5A2P05997 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL5A2P05997 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
COL5A2P05997 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC20.72■□□□□ 0.91
COL5A2P05997 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC20.72■□□□□ 0.91
COL5A2P05997 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC20.72■□□□□ 0.91
COL5A2P05997 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC20.72■□□□□ 0.91
COL5A2P05997 LRRFIP1P1-201ENST00000498774 2246 ntBASIC20.72■□□□□ 0.91
COL5A2P05997 MIR4722-201ENST00000578292 60 ntBASIC20.72■□□□□ 0.91
COL5A2P05997 RN7SL48P-201ENST00000579283 293 ntBASIC20.72■□□□□ 0.91
COL5A2P05997 MIR4706-201ENST00000582134 82 ntBASIC20.72■□□□□ 0.91
COL5A2P05997 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC20.72■□□□□ 0.91
COL5A2P05997 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL5A2P05997 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL5A2P05997 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
COL5A2P05997 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL5A2P05997 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
COL5A2P05997 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC20.71■□□□□ 0.91
COL5A2P05997 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL5A2P05997 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL5A2P05997 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.71■□□□□ 0.91
COL5A2P05997 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL5A2P05997 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
COL5A2P05997 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL5A2P05997 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL5A2P05997 AC016700.1-201ENST00000429424 312 ntBASIC20.71■□□□□ 0.91
COL5A2P05997 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL5A2P05997 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC20.71■□□□□ 0.91
COL5A2P05997 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL5A2P05997 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.71■□□□□ 0.91
COL5A2P05997 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.71■□□□□ 0.91
COL5A2P05997 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL5A2P05997 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL5A2P05997 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL5A2P05997 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC20.71■□□□□ 0.91
COL5A2P05997 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.71■□□□□ 0.91
COL5A2P05997 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
COL5A2P05997 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.71■□□□□ 0.91
COL5A2P05997 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL5A2P05997 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL5A2P05997 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC20.71■□□□□ 0.91
COL5A2P05997 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
COL5A2P05997 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.7■□□□□ 0.9
COL5A2P05997 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.7■□□□□ 0.9
COL5A2P05997 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC20.7■□□□□ 0.9
COL5A2P05997 ME2P1-201ENST00000426028 1970 ntBASIC20.7■□□□□ 0.9
COL5A2P05997 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC20.7■□□□□ 0.9
COL5A2P05997 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL5A2P05997 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL5A2P05997 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL5A2P05997 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
COL5A2P05997 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms