Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.22■□□□□ 0.67
POLR3DP05423 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.22■□□□□ 0.67
POLR3DP05423 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR3DP05423 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR3DP05423 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.22■□□□□ 0.67
POLR3DP05423 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR3DP05423 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR3DP05423 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.22■□□□□ 0.67
POLR3DP05423 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.22■□□□□ 0.67
POLR3DP05423 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
POLR3DP05423 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR3DP05423 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.22■□□□□ 0.67
POLR3DP05423 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
POLR3DP05423 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.22■□□□□ 0.67
POLR3DP05423 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR3DP05423 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR3DP05423 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR3DP05423 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
POLR3DP05423 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.21■□□□□ 0.67
POLR3DP05423 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR3DP05423 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR3DP05423 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR3DP05423 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR3DP05423 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.21■□□□□ 0.67
POLR3DP05423 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR3DP05423 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR3DP05423 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR3DP05423 SPDYE17-201ENST00000412399 783 ntBASIC19.21■□□□□ 0.67
POLR3DP05423 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.21■□□□□ 0.67
POLR3DP05423 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.21■□□□□ 0.67
POLR3DP05423 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.21■□□□□ 0.67
POLR3DP05423 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.21■□□□□ 0.67
POLR3DP05423 AC004233.3-201ENST00000607794 1269 ntBASIC19.21■□□□□ 0.67
POLR3DP05423 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
POLR3DP05423 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR3DP05423 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
POLR3DP05423 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
POLR3DP05423 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR3DP05423 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.21■□□□□ 0.67
POLR3DP05423 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
POLR3DP05423 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR3DP05423 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
POLR3DP05423 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.21■□□□□ 0.67
POLR3DP05423 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR3DP05423 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR3DP05423 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR3DP05423 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
POLR3DP05423 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.2■□□□□ 0.66
POLR3DP05423 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR3DP05423 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR3DP05423 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR3DP05423 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.2■□□□□ 0.66
POLR3DP05423 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.2■□□□□ 0.66
POLR3DP05423 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.2■□□□□ 0.66
POLR3DP05423 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR3DP05423 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
POLR3DP05423 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR3DP05423 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR3DP05423 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR3DP05423 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
POLR3DP05423 AC015922.1-201ENST00000421102 1152 ntBASIC19.2■□□□□ 0.66
POLR3DP05423 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.2■□□□□ 0.66
POLR3DP05423 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.2■□□□□ 0.66
POLR3DP05423 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.2■□□□□ 0.66
POLR3DP05423 AC135586.1-201ENST00000539323 574 ntBASIC19.2■□□□□ 0.66
POLR3DP05423 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
POLR3DP05423 AC010336.2-201ENST00000564226 506 ntBASIC19.2■□□□□ 0.66
POLR3DP05423 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
POLR3DP05423 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
POLR3DP05423 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
POLR3DP05423 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
POLR3DP05423 AL033527.5-202ENST00000641632 1098 ntBASIC19.2■□□□□ 0.66
POLR3DP05423 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
POLR3DP05423 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR3DP05423 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.2■□□□□ 0.66
POLR3DP05423 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
POLR3DP05423 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.2■□□□□ 0.66
POLR3DP05423 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
POLR3DP05423 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.2■□□□□ 0.66
POLR3DP05423 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
POLR3DP05423 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR3DP05423 REXO1L8P-201ENST00000604378 1897 ntBASIC19.2■□□□□ 0.66
POLR3DP05423 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.2■□□□□ 0.66
POLR3DP05423 AL136982.4-201ENST00000437689 1740 ntBASIC19.2■□□□□ 0.66
POLR3DP05423 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
POLR3DP05423 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR3DP05423 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
POLR3DP05423 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR3DP05423 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
POLR3DP05423 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
POLR3DP05423 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR3DP05423 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR3DP05423 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
POLR3DP05423 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR3DP05423 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
POLR3DP05423 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.19■□□□□ 0.66
POLR3DP05423 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.19■□□□□ 0.66
POLR3DP05423 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
POLR3DP05423 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR3DP05423 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms