Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHGBP05060 LINC01115-203ENST00000606068 577 ntBASIC19.25■□□□□ 0.67
CHGBP05060 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHGBP05060 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CHGBP05060 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHGBP05060 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.25■□□□□ 0.67
CHGBP05060 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.25■□□□□ 0.67
CHGBP05060 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.25■□□□□ 0.67
CHGBP05060 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.25■□□□□ 0.67
CHGBP05060 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHGBP05060 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.25■□□□□ 0.67
CHGBP05060 AC009090.5-201ENST00000624886 2285 ntBASIC19.25■□□□□ 0.67
CHGBP05060 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHGBP05060 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.25■□□□□ 0.67
CHGBP05060 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHGBP05060 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHGBP05060 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHGBP05060 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.24■□□□□ 0.67
CHGBP05060 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CHGBP05060 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHGBP05060 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHGBP05060 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHGBP05060 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHGBP05060 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHGBP05060 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CHGBP05060 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHGBP05060 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.24■□□□□ 0.67
CHGBP05060 AC002472.2-201ENST00000442739 958 ntBASIC19.24■□□□□ 0.67
CHGBP05060 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.24■□□□□ 0.67
CHGBP05060 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.24■□□□□ 0.67
CHGBP05060 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHGBP05060 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHGBP05060 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.24■□□□□ 0.67
CHGBP05060 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.24■□□□□ 0.67
CHGBP05060 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.24■□□□□ 0.67
CHGBP05060 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.24■□□□□ 0.67
CHGBP05060 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.24■□□□□ 0.67
CHGBP05060 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.24■□□□□ 0.67
CHGBP05060 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.24■□□□□ 0.67
CHGBP05060 AJ011932.1-201ENST00000621707 465 ntBASIC19.24■□□□□ 0.67
CHGBP05060 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHGBP05060 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.24■□□□□ 0.67
CHGBP05060 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHGBP05060 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHGBP05060 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.24■□□□□ 0.67
CHGBP05060 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHGBP05060 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.24■□□□□ 0.67
CHGBP05060 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CHGBP05060 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.24■□□□□ 0.67
CHGBP05060 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHGBP05060 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHGBP05060 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.24■□□□□ 0.67
CHGBP05060 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHGBP05060 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHGBP05060 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.24■□□□□ 0.67
CHGBP05060 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHGBP05060 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.24■□□□□ 0.67
CHGBP05060 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHGBP05060 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHGBP05060 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHGBP05060 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHGBP05060 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.23■□□□□ 0.67
CHGBP05060 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHGBP05060 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.23■□□□□ 0.67
CHGBP05060 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHGBP05060 CICP13-201ENST00000422015 2789 ntBASIC19.23■□□□□ 0.67
CHGBP05060 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHGBP05060 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHGBP05060 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
CHGBP05060 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHGBP05060 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHGBP05060 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CHGBP05060 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHGBP05060 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
CHGBP05060 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHGBP05060 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHGBP05060 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.23■□□□□ 0.67
CHGBP05060 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.23■□□□□ 0.67
CHGBP05060 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHGBP05060 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.23■□□□□ 0.67
CHGBP05060 RN7SL618P-201ENST00000477850 296 ntBASIC19.23■□□□□ 0.67
CHGBP05060 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.23■□□□□ 0.67
CHGBP05060 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHGBP05060 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.23■□□□□ 0.67
CHGBP05060 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.23■□□□□ 0.67
CHGBP05060 MIR4313-201ENST00000580760 101 ntBASIC19.23■□□□□ 0.67
CHGBP05060 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
CHGBP05060 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.23■□□□□ 0.67
CHGBP05060 AF228730.6-201ENST00000641497 218 ntBASIC19.23■□□□□ 0.67
CHGBP05060 AC084121.3-201ENST00000641716 218 ntBASIC19.23■□□□□ 0.67
CHGBP05060 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.23■□□□□ 0.67
CHGBP05060 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHGBP05060 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.23■□□□□ 0.67
CHGBP05060 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHGBP05060 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CHGBP05060 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.23■□□□□ 0.67
CHGBP05060 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CHGBP05060 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CHGBP05060 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.23■□□□□ 0.67
CHGBP05060 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms