Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
SPTA1P02549 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.51□□□□□ -0.09
SPTA1P02549 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.51□□□□□ -0.09
SPTA1P02549 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPTA1P02549 AL354751.1-201ENST00000412768 1863 ntBASIC14.51□□□□□ -0.09
SPTA1P02549 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPTA1P02549 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPTA1P02549 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPTA1P02549 AC091046.1-201ENST00000331871 207 ntBASIC14.51□□□□□ -0.09
SPTA1P02549 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.51□□□□□ -0.09
SPTA1P02549 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.51□□□□□ -0.09
SPTA1P02549 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.51□□□□□ -0.09
SPTA1P02549 AC134915.1-201ENST00000426461 574 ntBASIC14.51□□□□□ -0.09
SPTA1P02549 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.51□□□□□ -0.09
SPTA1P02549 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.51□□□□□ -0.09
SPTA1P02549 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.51□□□□□ -0.09
SPTA1P02549 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPTA1P02549 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.51□□□□□ -0.09
SPTA1P02549 CROCCP2-202ENST00000412962 2773 ntBASIC14.51□□□□□ -0.09
SPTA1P02549 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SPTA1P02549 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPTA1P02549 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.51□□□□□ -0.09
SPTA1P02549 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPTA1P02549 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPTA1P02549 AC134312.5-201ENST00000568031 1313 ntBASIC14.51□□□□□ -0.09
SPTA1P02549 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SPTA1P02549 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPTA1P02549 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.51□□□□□ -0.09
SPTA1P02549 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPTA1P02549 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.51□□□□□ -0.09
SPTA1P02549 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPTA1P02549 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPTA1P02549 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SPTA1P02549 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPTA1P02549 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SPTA1P02549 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPTA1P02549 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SPTA1P02549 FO393414.2-201ENST00000405153 598 ntBASIC14.51□□□□□ -0.09
SPTA1P02549 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.51□□□□□ -0.09
SPTA1P02549 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.51□□□□□ -0.09
SPTA1P02549 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPTA1P02549 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.51□□□□□ -0.09
SPTA1P02549 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.51□□□□□ -0.09
SPTA1P02549 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.51□□□□□ -0.09
SPTA1P02549 LINC01115-203ENST00000606068 577 ntBASIC14.51□□□□□ -0.09
SPTA1P02549 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.51□□□□□ -0.09
SPTA1P02549 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SPTA1P02549 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SPTA1P02549 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SPTA1P02549 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.5□□□□□ -0.09
SPTA1P02549 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.5□□□□□ -0.09
SPTA1P02549 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SPTA1P02549 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
SPTA1P02549 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.5□□□□□ -0.09
SPTA1P02549 FTH1P14-201ENST00000482930 551 ntBASIC14.5□□□□□ -0.09
SPTA1P02549 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.5□□□□□ -0.09
SPTA1P02549 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SPTA1P02549 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.5□□□□□ -0.09
SPTA1P02549 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.5□□□□□ -0.09
SPTA1P02549 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SPTA1P02549 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 AP003680.1-201ENST00000598970 3660 ntBASIC14.5□□□□□ -0.09
SPTA1P02549 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.5□□□□□ -0.09
SPTA1P02549 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.5□□□□□ -0.09
SPTA1P02549 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.5□□□□□ -0.09
SPTA1P02549 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SPTA1P02549 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.5□□□□□ -0.09
SPTA1P02549 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.5□□□□□ -0.09
SPTA1P02549 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPTA1P02549 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
SPTA1P02549 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SPTA1P02549 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.5□□□□□ -0.09
SPTA1P02549 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.5□□□□□ -0.09
SPTA1P02549 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.5□□□□□ -0.09
SPTA1P02549 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.5□□□□□ -0.09
SPTA1P02549 AC133539.2-201ENST00000604757 467 ntBASIC14.5□□□□□ -0.09
SPTA1P02549 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
SPTA1P02549 AL512652.2-201ENST00000625156 1716 ntBASIC14.5□□□□□ -0.09
SPTA1P02549 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms