Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ALDH1A1P00352 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.11■□□□□ 0.49
ALDH1A1P00352 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ALDH1A1P00352 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ALDH1A1P00352 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
ALDH1A1P00352 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ALDH1A1P00352 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ALDH1A1P00352 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ALDH1A1P00352 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ALDH1A1P00352 MIR33B-201ENST00000385104 96 ntBASIC18.11■□□□□ 0.49
ALDH1A1P00352 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ALDH1A1P00352 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ALDH1A1P00352 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ALDH1A1P00352 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC18.11■□□□□ 0.49
ALDH1A1P00352 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC18.11■□□□□ 0.49
ALDH1A1P00352 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ALDH1A1P00352 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ALDH1A1P00352 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.11■□□□□ 0.49
ALDH1A1P00352 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ALDH1A1P00352 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
ALDH1A1P00352 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ALDH1A1P00352 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ALDH1A1P00352 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.11■□□□□ 0.49
ALDH1A1P00352 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ALDH1A1P00352 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ALDH1A1P00352 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
ALDH1A1P00352 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
ALDH1A1P00352 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
ALDH1A1P00352 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.1■□□□□ 0.49
ALDH1A1P00352 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.1■□□□□ 0.49
ALDH1A1P00352 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.1■□□□□ 0.49
ALDH1A1P00352 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ALDH1A1P00352 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
ALDH1A1P00352 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ALDH1A1P00352 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.1■□□□□ 0.49
ALDH1A1P00352 GGT3P-204ENST00000453783 1664 ntBASIC18.1■□□□□ 0.49
ALDH1A1P00352 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ALDH1A1P00352 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.1■□□□□ 0.49
ALDH1A1P00352 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.1■□□□□ 0.49
ALDH1A1P00352 AC018735.1-201ENST00000437208 1502 ntBASIC18.1■□□□□ 0.49
ALDH1A1P00352 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.1■□□□□ 0.49
ALDH1A1P00352 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ALDH1A1P00352 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ALDH1A1P00352 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
ALDH1A1P00352 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ALDH1A1P00352 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.1■□□□□ 0.49
ALDH1A1P00352 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC18.1■□□□□ 0.49
ALDH1A1P00352 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC18.1■□□□□ 0.49
ALDH1A1P00352 HSPB1P2-201ENST00000448722 546 ntBASIC18.1■□□□□ 0.49
ALDH1A1P00352 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC18.1■□□□□ 0.49
ALDH1A1P00352 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ALDH1A1P00352 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC18.1■□□□□ 0.49
ALDH1A1P00352 MIR5572-201ENST00000583188 137 ntBASIC18.1■□□□□ 0.49
ALDH1A1P00352 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ALDH1A1P00352 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ALDH1A1P00352 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ALDH1A1P00352 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ALDH1A1P00352 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.1■□□□□ 0.49
ALDH1A1P00352 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ALDH1A1P00352 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ALDH1A1P00352 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ALDH1A1P00352 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.09■□□□□ 0.49
ALDH1A1P00352 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.09■□□□□ 0.49
ALDH1A1P00352 AL592424.1-201ENST00000563624 1536 ntBASIC18.09■□□□□ 0.49
ALDH1A1P00352 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ALDH1A1P00352 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ALDH1A1P00352 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ALDH1A1P00352 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ALDH1A1P00352 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.09■□□□□ 0.49
ALDH1A1P00352 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ALDH1A1P00352 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ALDH1A1P00352 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ALDH1A1P00352 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.09■□□□□ 0.49
ALDH1A1P00352 DEF8-202ENST00000418391 852 ntTSL 2 BASIC18.09■□□□□ 0.49
ALDH1A1P00352 ATP6V0CP2-201ENST00000469409 207 ntBASIC18.09■□□□□ 0.49
ALDH1A1P00352 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ALDH1A1P00352 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.09■□□□□ 0.49
ALDH1A1P00352 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ALDH1A1P00352 AP001505.2-201ENST00000616815 443 ntBASIC18.09■□□□□ 0.49
ALDH1A1P00352 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ALDH1A1P00352 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ALDH1A1P00352 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ALDH1A1P00352 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
ALDH1A1P00352 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ALDH1A1P00352 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.09■□□□□ 0.49
ALDH1A1P00352 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ALDH1A1P00352 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.09■□□□□ 0.49
ALDH1A1P00352 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.09■□□□□ 0.49
ALDH1A1P00352 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.09■□□□□ 0.49
ALDH1A1P00352 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
ALDH1A1P00352 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
ALDH1A1P00352 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ALDH1A1P00352 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ALDH1A1P00352 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.08■□□□□ 0.49
ALDH1A1P00352 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.08■□□□□ 0.49
ALDH1A1P00352 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
ALDH1A1P00352 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ALDH1A1P00352 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
ALDH1A1P00352 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
ALDH1A1P00352 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms