Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-2O95096 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-2O95096 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NKX2-2O95096 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.81□□□□□ -0.04
NKX2-2O95096 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NKX2-2O95096 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-2O95096 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-2O95096 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-2O95096 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
NKX2-2O95096 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.81□□□□□ -0.04
NKX2-2O95096 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-2O95096 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.81□□□□□ -0.04
NKX2-2O95096 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.81□□□□□ -0.04
NKX2-2O95096 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.81□□□□□ -0.04
NKX2-2O95096 PHKG1P2-201ENST00000457537 863 ntBASIC14.81□□□□□ -0.04
NKX2-2O95096 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-2O95096 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.81□□□□□ -0.04
NKX2-2O95096 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.81□□□□□ -0.04
NKX2-2O95096 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.81□□□□□ -0.04
NKX2-2O95096 AC069262.1-201ENST00000539058 672 ntBASIC14.81□□□□□ -0.04
NKX2-2O95096 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.81□□□□□ -0.04
NKX2-2O95096 MIR4453-201ENST00000584019 89 ntBASIC14.81□□□□□ -0.04
NKX2-2O95096 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-2O95096 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.81□□□□□ -0.04
NKX2-2O95096 AL450472.2-201ENST00000603663 1156 ntBASIC14.81□□□□□ -0.04
NKX2-2O95096 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.81□□□□□ -0.04
NKX2-2O95096 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-2O95096 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.81□□□□□ -0.04
NKX2-2O95096 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-2O95096 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-2O95096 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NKX2-2O95096 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-2O95096 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.81□□□□□ -0.04
NKX2-2O95096 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-2O95096 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-2O95096 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NKX2-2O95096 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-2O95096 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
NKX2-2O95096 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX2-2O95096 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NKX2-2O95096 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.81□□□□□ -0.04
NKX2-2O95096 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.81□□□□□ -0.04
NKX2-2O95096 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NKX2-2O95096 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
NKX2-2O95096 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-2O95096 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-2O95096 AC132872.4-202ENST00000622924 2756 ntBASIC14.8□□□□□ -0.04
NKX2-2O95096 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-2O95096 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-2O95096 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NKX2-2O95096 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.8□□□□□ -0.04
NKX2-2O95096 AC018892.3-201ENST00000623986 2499 ntBASIC14.8□□□□□ -0.04
NKX2-2O95096 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.8□□□□□ -0.04
NKX2-2O95096 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-2O95096 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NKX2-2O95096 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.8□□□□□ -0.04
NKX2-2O95096 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.8□□□□□ -0.04
NKX2-2O95096 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.8□□□□□ -0.04
NKX2-2O95096 TSEN15P1-201ENST00000423257 515 ntBASIC14.8□□□□□ -0.04
NKX2-2O95096 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.8□□□□□ -0.04
NKX2-2O95096 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.8□□□□□ -0.04
NKX2-2O95096 AC109322.1-201ENST00000524499 1264 ntBASIC14.8□□□□□ -0.04
NKX2-2O95096 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-2O95096 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
NKX2-2O95096 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.8□□□□□ -0.04
NKX2-2O95096 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
NKX2-2O95096 AP001160.2-201ENST00000596071 487 ntBASIC14.8□□□□□ -0.04
NKX2-2O95096 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-2O95096 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.8□□□□□ -0.04
NKX2-2O95096 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-2O95096 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.8□□□□□ -0.04
NKX2-2O95096 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NKX2-2O95096 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NKX2-2O95096 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.8□□□□□ -0.04
NKX2-2O95096 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-2O95096 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-2O95096 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.8□□□□□ -0.04
NKX2-2O95096 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NKX2-2O95096 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.8□□□□□ -0.04
NKX2-2O95096 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-2O95096 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.8□□□□□ -0.04
NKX2-2O95096 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-2O95096 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-2O95096 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NKX2-2O95096 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-2O95096 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-2O95096 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-2O95096 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NKX2-2O95096 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.79□□□□□ -0.04
NKX2-2O95096 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.79□□□□□ -0.04
NKX2-2O95096 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-2O95096 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.79□□□□□ -0.04
NKX2-2O95096 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-2O95096 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NKX2-2O95096 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX2-2O95096 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
NKX2-2O95096 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.79□□□□□ -0.04
NKX2-2O95096 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
NKX2-2O95096 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NKX2-2O95096 AL139400.1-201ENST00000366220 510 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms