Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ALX3O95076 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ALX3O95076 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ALX3O95076 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.33□□□□□ -0.12
ALX3O95076 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ALX3O95076 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.33□□□□□ -0.12
ALX3O95076 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ALX3O95076 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ALX3O95076 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.33□□□□□ -0.12
ALX3O95076 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ALX3O95076 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.33□□□□□ -0.12
ALX3O95076 SLC25A6P2-201ENST00000497974 877 ntBASIC14.33□□□□□ -0.12
ALX3O95076 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.33□□□□□ -0.12
ALX3O95076 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
ALX3O95076 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.33□□□□□ -0.12
ALX3O95076 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.33□□□□□ -0.12
ALX3O95076 AC020765.3-201ENST00000613051 740 ntBASIC14.33□□□□□ -0.12
ALX3O95076 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.33□□□□□ -0.12
ALX3O95076 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ALX3O95076 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ALX3O95076 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ALX3O95076 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ALX3O95076 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.33□□□□□ -0.12
ALX3O95076 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ALX3O95076 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.33□□□□□ -0.12
ALX3O95076 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ALX3O95076 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ALX3O95076 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
ALX3O95076 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ALX3O95076 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ALX3O95076 SLC22A20-204ENST00000530038 1673 ntBASIC14.33□□□□□ -0.12
ALX3O95076 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ALX3O95076 AC006449.6-201ENST00000612330 2296 ntBASIC14.32□□□□□ -0.12
ALX3O95076 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ALX3O95076 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.32□□□□□ -0.12
ALX3O95076 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.32□□□□□ -0.12
ALX3O95076 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
ALX3O95076 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 AL603832.2-201ENST00000566195 2125 ntBASIC14.32□□□□□ -0.12
ALX3O95076 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ALX3O95076 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ALX3O95076 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.32□□□□□ -0.12
ALX3O95076 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 PCGF3-213ENST00000620529 1899 ntBASIC14.32□□□□□ -0.12
ALX3O95076 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.32□□□□□ -0.12
ALX3O95076 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
ALX3O95076 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
ALX3O95076 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.32□□□□□ -0.12
ALX3O95076 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.32□□□□□ -0.12
ALX3O95076 AC107918.2-201ENST00000530817 355 ntBASIC14.32□□□□□ -0.12
ALX3O95076 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.32□□□□□ -0.12
ALX3O95076 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.32□□□□□ -0.12
ALX3O95076 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 AC010654.1-201ENST00000615722 808 ntBASIC14.32□□□□□ -0.12
ALX3O95076 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ALX3O95076 AC107918.4-202ENST00000641623 219 ntBASIC14.32□□□□□ -0.12
ALX3O95076 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ALX3O95076 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 AL365209.1-201ENST00000624418 6473 ntBASIC14.32□□□□□ -0.12
ALX3O95076 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.32□□□□□ -0.12
ALX3O95076 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
ALX3O95076 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.32□□□□□ -0.12
ALX3O95076 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
ALX3O95076 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.32□□□□□ -0.12
ALX3O95076 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ALX3O95076 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ALX3O95076 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ALX3O95076 AC006486.2-201ENST00000624246 2199 ntBASIC14.32□□□□□ -0.12
ALX3O95076 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ALX3O95076 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.31□□□□□ -0.12
ALX3O95076 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ALX3O95076 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ALX3O95076 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
ALX3O95076 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.31□□□□□ -0.12
ALX3O95076 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ALX3O95076 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms