Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KDM4BO94953 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.24□□□□□ -0.13
KDM4BO94953 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
KDM4BO94953 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.24□□□□□ -0.13
KDM4BO94953 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.24□□□□□ -0.13
KDM4BO94953 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
KDM4BO94953 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.24□□□□□ -0.13
KDM4BO94953 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.24□□□□□ -0.13
KDM4BO94953 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KDM4BO94953 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
KDM4BO94953 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.24□□□□□ -0.13
KDM4BO94953 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KDM4BO94953 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.23□□□□□ -0.13
KDM4BO94953 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
KDM4BO94953 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.23□□□□□ -0.13
KDM4BO94953 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.23□□□□□ -0.13
KDM4BO94953 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.23□□□□□ -0.13
KDM4BO94953 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 KRT18P27-201ENST00000427733 1299 ntBASIC14.23□□□□□ -0.13
KDM4BO94953 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.23□□□□□ -0.13
KDM4BO94953 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.23□□□□□ -0.13
KDM4BO94953 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.23□□□□□ -0.13
KDM4BO94953 IFNL4P1-201ENST00000607083 540 ntBASIC14.23□□□□□ -0.13
KDM4BO94953 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.23□□□□□ -0.13
KDM4BO94953 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.23□□□□□ -0.13
KDM4BO94953 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.23□□□□□ -0.13
KDM4BO94953 AP001350.2-201ENST00000625104 1094 ntBASIC14.23□□□□□ -0.13
KDM4BO94953 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
KDM4BO94953 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.23□□□□□ -0.13
KDM4BO94953 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.23□□□□□ -0.13
KDM4BO94953 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
KDM4BO94953 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.23□□□□□ -0.13
KDM4BO94953 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
KDM4BO94953 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.23□□□□□ -0.13
KDM4BO94953 PCGF3-213ENST00000620529 1899 ntBASIC14.23□□□□□ -0.13
KDM4BO94953 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.23□□□□□ -0.13
KDM4BO94953 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDM4BO94953 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.22□□□□□ -0.13
KDM4BO94953 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.22□□□□□ -0.13
KDM4BO94953 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
KDM4BO94953 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
KDM4BO94953 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.22□□□□□ -0.13
KDM4BO94953 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
KDM4BO94953 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 AC131009.4-201ENST00000624048 1740 ntBASIC14.22□□□□□ -0.13
KDM4BO94953 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.22□□□□□ -0.13
KDM4BO94953 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
KDM4BO94953 POU5F1P6-201ENST00000466990 990 ntBASIC14.22□□□□□ -0.13
KDM4BO94953 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.22□□□□□ -0.13
KDM4BO94953 RPS15P9-201ENST00000494093 319 ntBASIC14.22□□□□□ -0.13
KDM4BO94953 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
KDM4BO94953 CLEC4GP1-201ENST00000596555 870 ntBASIC14.22□□□□□ -0.13
KDM4BO94953 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.22□□□□□ -0.13
KDM4BO94953 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.22□□□□□ -0.13
KDM4BO94953 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
KDM4BO94953 GGTLC5P-201ENST00000617623 998 ntBASIC14.22□□□□□ -0.13
KDM4BO94953 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.22□□□□□ -0.13
KDM4BO94953 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
KDM4BO94953 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
KDM4BO94953 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.22□□□□□ -0.13
KDM4BO94953 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
KDM4BO94953 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.22□□□□□ -0.13
KDM4BO94953 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDM4BO94953 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms