Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.26■□□□□ 0.19
PRAMEF11O60813 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF11O60813 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF11O60813 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF11O60813 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF11O60813 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF11O60813 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.26■□□□□ 0.19
PRAMEF11O60813 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF11O60813 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PRAMEF11O60813 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PRAMEF11O60813 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF11O60813 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRAMEF11O60813 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PRAMEF11O60813 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF11O60813 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF11O60813 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF11O60813 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF11O60813 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF11O60813 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF11O60813 MIR770-201ENST00000390219 98 ntBASIC16.25■□□□□ 0.19
PRAMEF11O60813 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 BASP1P1-201ENST00000430708 665 ntBASIC16.25■□□□□ 0.19
PRAMEF11O60813 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 AC093214.1-201ENST00000511688 1107 ntBASIC16.25■□□□□ 0.19
PRAMEF11O60813 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.25■□□□□ 0.19
PRAMEF11O60813 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF11O60813 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF11O60813 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF11O60813 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF11O60813 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF11O60813 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF11O60813 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.25■□□□□ 0.19
PRAMEF11O60813 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRAMEF11O60813 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 ZNF890P-202ENST00000530367 1156 ntBASIC16.24■□□□□ 0.19
PRAMEF11O60813 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 HNRNPUP1-201ENST00000554987 333 ntBASIC16.24■□□□□ 0.19
PRAMEF11O60813 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PRAMEF11O60813 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRAMEF11O60813 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms