Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRICKLE3O43900 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRICKLE3O43900 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRICKLE3O43900 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRICKLE3O43900 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRICKLE3O43900 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.42■□□□□ 0.06
PRICKLE3O43900 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRICKLE3O43900 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
PRICKLE3O43900 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.42■□□□□ 0.06
PRICKLE3O43900 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PRICKLE3O43900 REXO1L1P-202ENST00000608646 1974 ntBASIC15.42■□□□□ 0.06
PRICKLE3O43900 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.42■□□□□ 0.06
PRICKLE3O43900 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRICKLE3O43900 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRICKLE3O43900 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PRICKLE3O43900 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRICKLE3O43900 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PRICKLE3O43900 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRICKLE3O43900 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRICKLE3O43900 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.41■□□□□ 0.06
PRICKLE3O43900 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.41■□□□□ 0.06
PRICKLE3O43900 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRICKLE3O43900 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.41■□□□□ 0.06
PRICKLE3O43900 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.41■□□□□ 0.06
PRICKLE3O43900 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.41■□□□□ 0.06
PRICKLE3O43900 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRICKLE3O43900 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRICKLE3O43900 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRICKLE3O43900 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRICKLE3O43900 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.41■□□□□ 0.06
PRICKLE3O43900 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.41■□□□□ 0.06
PRICKLE3O43900 MRPS18AP1-201ENST00000414458 589 ntBASIC15.41■□□□□ 0.06
PRICKLE3O43900 BASP1P1-201ENST00000430708 665 ntBASIC15.41■□□□□ 0.06
PRICKLE3O43900 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.41■□□□□ 0.06
PRICKLE3O43900 PHKG1P2-201ENST00000457537 863 ntBASIC15.41■□□□□ 0.06
PRICKLE3O43900 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.41■□□□□ 0.06
PRICKLE3O43900 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.41■□□□□ 0.06
PRICKLE3O43900 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRICKLE3O43900 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
PRICKLE3O43900 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.41■□□□□ 0.06
PRICKLE3O43900 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRICKLE3O43900 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRICKLE3O43900 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRICKLE3O43900 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PRICKLE3O43900 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRICKLE3O43900 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRICKLE3O43900 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRICKLE3O43900 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.41■□□□□ 0.06
PRICKLE3O43900 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRICKLE3O43900 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
PRICKLE3O43900 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRICKLE3O43900 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.41■□□□□ 0.06
PRICKLE3O43900 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRICKLE3O43900 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
PRICKLE3O43900 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRICKLE3O43900 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PRICKLE3O43900 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRICKLE3O43900 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRICKLE3O43900 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRICKLE3O43900 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRICKLE3O43900 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.4■□□□□ 0.06
PRICKLE3O43900 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.4■□□□□ 0.06
PRICKLE3O43900 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRICKLE3O43900 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRICKLE3O43900 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PRICKLE3O43900 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRICKLE3O43900 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.4■□□□□ 0.06
PRICKLE3O43900 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.4■□□□□ 0.06
PRICKLE3O43900 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PRICKLE3O43900 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRICKLE3O43900 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRICKLE3O43900 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRICKLE3O43900 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRICKLE3O43900 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRICKLE3O43900 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.4■□□□□ 0.06
PRICKLE3O43900 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PRICKLE3O43900 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.4■□□□□ 0.06
PRICKLE3O43900 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.4■□□□□ 0.06
PRICKLE3O43900 SERBP1P3-201ENST00000459980 809 ntBASIC15.4■□□□□ 0.06
PRICKLE3O43900 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.4■□□□□ 0.06
PRICKLE3O43900 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.4■□□□□ 0.06
PRICKLE3O43900 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRICKLE3O43900 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRICKLE3O43900 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.4■□□□□ 0.06
PRICKLE3O43900 AC009407.1-201ENST00000568958 598 ntBASIC15.4■□□□□ 0.06
PRICKLE3O43900 MIR6069-201ENST00000620069 79 ntBASIC15.4■□□□□ 0.06
PRICKLE3O43900 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.4■□□□□ 0.06
PRICKLE3O43900 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
PRICKLE3O43900 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.4■□□□□ 0.06
PRICKLE3O43900 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRICKLE3O43900 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PRICKLE3O43900 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.4■□□□□ 0.06
PRICKLE3O43900 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.4■□□□□ 0.06
PRICKLE3O43900 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PRICKLE3O43900 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PRICKLE3O43900 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRICKLE3O43900 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRICKLE3O43900 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.4■□□□□ 0.06
PRICKLE3O43900 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.4■□□□□ 0.06
PRICKLE3O43900 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms