Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC28A2O43868 RARRES2P8-201ENST00000566335 367 ntBASIC15.57■□□□□ 0.08
SLC28A2O43868 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC28A2O43868 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC28A2O43868 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC28A2O43868 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.57■□□□□ 0.08
SLC28A2O43868 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC28A2O43868 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC28A2O43868 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC28A2O43868 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC28A2O43868 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC28A2O43868 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
SLC28A2O43868 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC28A2O43868 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC28A2O43868 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC28A2O43868 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC28A2O43868 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC28A2O43868 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC28A2O43868 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SLC28A2O43868 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC28A2O43868 MTHFR-217ENST00000641820 1569 ntBASIC15.57■□□□□ 0.08
SLC28A2O43868 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC28A2O43868 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SLC28A2O43868 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC28A2O43868 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC28A2O43868 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC28A2O43868 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC28A2O43868 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SLC28A2O43868 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC28A2O43868 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC28A2O43868 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC28A2O43868 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SLC28A2O43868 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SLC28A2O43868 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC28A2O43868 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC28A2O43868 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SLC28A2O43868 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC28A2O43868 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC28A2O43868 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC28A2O43868 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC28A2O43868 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC28A2O43868 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC28A2O43868 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC28A2O43868 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC28A2O43868 SPDYE14P-201ENST00000442619 822 ntBASIC15.56■□□□□ 0.08
SLC28A2O43868 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.56■□□□□ 0.08
SLC28A2O43868 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC28A2O43868 AC004890.2-204ENST00000481968 304 ntBASIC15.56■□□□□ 0.08
SLC28A2O43868 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC28A2O43868 CYP2A7P1-201ENST00000595391 815 ntBASIC15.56■□□□□ 0.08
SLC28A2O43868 AP001350.2-201ENST00000625104 1094 ntBASIC15.56■□□□□ 0.08
SLC28A2O43868 AL353732.1-201ENST00000569618 1459 ntBASIC15.56■□□□□ 0.08
SLC28A2O43868 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC28A2O43868 SLC22A20-204ENST00000530038 1673 ntBASIC15.56■□□□□ 0.08
SLC28A2O43868 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC28A2O43868 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SLC28A2O43868 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SLC28A2O43868 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
SLC28A2O43868 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC28A2O43868 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC28A2O43868 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC28A2O43868 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SLC28A2O43868 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SLC28A2O43868 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SLC28A2O43868 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.56■□□□□ 0.08
SLC28A2O43868 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
SLC28A2O43868 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SLC28A2O43868 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC28A2O43868 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.56■□□□□ 0.08
SLC28A2O43868 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC28A2O43868 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SLC28A2O43868 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC28A2O43868 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC28A2O43868 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC28A2O43868 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC28A2O43868 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
SLC28A2O43868 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SLC28A2O43868 GGT4P-201ENST00000623672 1708 ntBASIC15.55■□□□□ 0.08
SLC28A2O43868 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC28A2O43868 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.55■□□□□ 0.08
SLC28A2O43868 AKAP8P1-201ENST00000434743 1349 ntBASIC15.55■□□□□ 0.08
SLC28A2O43868 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A2O43868 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
SLC28A2O43868 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.55■□□□□ 0.08
SLC28A2O43868 MIR1909-201ENST00000411312 80 ntBASIC15.55■□□□□ 0.08
SLC28A2O43868 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.55■□□□□ 0.08
SLC28A2O43868 SPCS2P4-201ENST00000436160 681 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms