Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.08■□□□□ 0.32
HOXA2O43364 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.08■□□□□ 0.32
HOXA2O43364 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HOXA2O43364 AL049840.4-201ENST00000602422 811 ntBASIC17.08■□□□□ 0.32
HOXA2O43364 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXA2O43364 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
HOXA2O43364 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXA2O43364 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXA2O43364 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXA2O43364 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXA2O43364 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HOXA2O43364 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXA2O43364 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXA2O43364 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXA2O43364 AC005229.1-201ENST00000392885 409 ntBASIC17.07■□□□□ 0.32
HOXA2O43364 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.07■□□□□ 0.32
HOXA2O43364 C1QBPP1-201ENST00000400117 770 ntBASIC17.07■□□□□ 0.32
HOXA2O43364 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXA2O43364 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
HOXA2O43364 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.07■□□□□ 0.32
HOXA2O43364 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 AC092658.1-201ENST00000505836 891 ntBASIC17.07■□□□□ 0.32
HOXA2O43364 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXA2O43364 AC120045.2-201ENST00000567334 178 ntBASIC17.07■□□□□ 0.32
HOXA2O43364 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.07■□□□□ 0.32
HOXA2O43364 AC124283.3-201ENST00000570869 594 ntBASIC17.07■□□□□ 0.32
HOXA2O43364 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.07■□□□□ 0.32
HOXA2O43364 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.07■□□□□ 0.32
HOXA2O43364 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.07■□□□□ 0.32
HOXA2O43364 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HOXA2O43364 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
HOXA2O43364 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA2O43364 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA2O43364 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA2O43364 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA2O43364 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA2O43364 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA2O43364 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HOXA2O43364 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA2O43364 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA2O43364 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HOXA2O43364 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
HOXA2O43364 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA2O43364 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA2O43364 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA2O43364 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA2O43364 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA2O43364 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HOXA2O43364 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HOXA2O43364 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HOXA2O43364 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXA2O43364 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.06■□□□□ 0.32
HOXA2O43364 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXA2O43364 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA2O43364 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA2O43364 AL355864.2-201ENST00000447420 863 ntBASIC17.06■□□□□ 0.32
HOXA2O43364 AC068587.3-201ENST00000526613 355 ntBASIC17.06■□□□□ 0.32
HOXA2O43364 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.06■□□□□ 0.32
HOXA2O43364 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.06■□□□□ 0.32
HOXA2O43364 HNRNPUP1-201ENST00000554987 333 ntBASIC17.06■□□□□ 0.32
HOXA2O43364 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.06■□□□□ 0.32
HOXA2O43364 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA2O43364 AL033527.4-201ENST00000641026 673 ntBASIC17.06■□□□□ 0.32
HOXA2O43364 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXA2O43364 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.06■□□□□ 0.32
HOXA2O43364 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA2O43364 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA2O43364 AC134407.2-201ENST00000625089 1978 ntBASIC17.06■□□□□ 0.32
HOXA2O43364 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXA2O43364 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HOXA2O43364 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA2O43364 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXA2O43364 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA2O43364 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA2O43364 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA2O43364 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA2O43364 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA2O43364 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXA2O43364 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms