Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HDAC3O15379 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HDAC3O15379 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HDAC3O15379 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HDAC3O15379 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HDAC3O15379 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HDAC3O15379 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HDAC3O15379 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HDAC3O15379 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HDAC3O15379 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDAC3O15379 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.69■□□□□ 0.1
HDAC3O15379 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HDAC3O15379 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDAC3O15379 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDAC3O15379 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDAC3O15379 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
HDAC3O15379 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.69■□□□□ 0.1
HDAC3O15379 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDAC3O15379 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.69■□□□□ 0.1
HDAC3O15379 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.69■□□□□ 0.1
HDAC3O15379 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDAC3O15379 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.69■□□□□ 0.1
HDAC3O15379 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.69■□□□□ 0.1
HDAC3O15379 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDAC3O15379 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HDAC3O15379 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.69■□□□□ 0.1
HDAC3O15379 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.69■□□□□ 0.1
HDAC3O15379 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.69■□□□□ 0.1
HDAC3O15379 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.69■□□□□ 0.1
HDAC3O15379 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.69■□□□□ 0.1
HDAC3O15379 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.69■□□□□ 0.1
HDAC3O15379 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HDAC3O15379 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDAC3O15379 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HDAC3O15379 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
HDAC3O15379 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.69■□□□□ 0.1
HDAC3O15379 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HDAC3O15379 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDAC3O15379 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDAC3O15379 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDAC3O15379 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
HDAC3O15379 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDAC3O15379 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
HDAC3O15379 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.68■□□□□ 0.1
HDAC3O15379 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC3O15379 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC3O15379 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HDAC3O15379 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC3O15379 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC3O15379 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.68■□□□□ 0.1
HDAC3O15379 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC3O15379 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC3O15379 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC3O15379 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC3O15379 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC3O15379 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC3O15379 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC3O15379 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC3O15379 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC3O15379 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC3O15379 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC3O15379 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC3O15379 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.68■□□□□ 0.1
HDAC3O15379 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.68■□□□□ 0.1
HDAC3O15379 AL513480.1-201ENST00000451731 511 ntBASIC15.68■□□□□ 0.1
HDAC3O15379 KRT18P34-201ENST00000488218 1270 ntBASIC15.68■□□□□ 0.1
HDAC3O15379 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.68■□□□□ 0.1
HDAC3O15379 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC3O15379 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.68■□□□□ 0.1
HDAC3O15379 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HDAC3O15379 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC3O15379 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.68■□□□□ 0.1
HDAC3O15379 CLEC4GP1-201ENST00000596555 870 ntBASIC15.68■□□□□ 0.1
HDAC3O15379 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HDAC3O15379 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC3O15379 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.68■□□□□ 0.1
HDAC3O15379 C18orf15-201ENST00000623680 2534 ntBASIC15.68■□□□□ 0.1
HDAC3O15379 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HDAC3O15379 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.68■□□□□ 0.1
HDAC3O15379 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.68■□□□□ 0.1
HDAC3O15379 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC3O15379 AL589702.1-201ENST00000641229 1509 ntBASIC15.68■□□□□ 0.1
HDAC3O15379 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC3O15379 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HDAC3O15379 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC3O15379 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC3O15379 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC3O15379 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC3O15379 AC134407.2-201ENST00000625089 1978 ntBASIC15.67■□□□□ 0.1
HDAC3O15379 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC3O15379 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.67■□□□□ 0.1
HDAC3O15379 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HDAC3O15379 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HDAC3O15379 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.67■□□□□ 0.1
HDAC3O15379 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC3O15379 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC3O15379 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HDAC3O15379 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HDAC3O15379 AP002414.3-201ENST00000589352 1468 ntBASIC15.67■□□□□ 0.1
HDAC3O15379 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms