Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC25.29■■□□□ 1.64
CHD1O14646 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC25.29■■□□□ 1.64
CHD1O14646 AC090164.2-201ENST00000611487 516 ntBASIC25.29■■□□□ 1.64
CHD1O14646 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC25.29■■□□□ 1.64
CHD1O14646 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC25.29■■□□□ 1.64
CHD1O14646 NF2-208ENST00000403435 2568 ntTSL 5 BASIC25.29■■□□□ 1.64
CHD1O14646 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC25.29■■□□□ 1.64
CHD1O14646 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
CHD1O14646 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC25.29■■□□□ 1.64
CHD1O14646 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC25.29■■□□□ 1.64
CHD1O14646 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC25.29■■□□□ 1.64
CHD1O14646 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CHD1O14646 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHD1O14646 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC25.29■■□□□ 1.64
CHD1O14646 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC25.29■■□□□ 1.64
CHD1O14646 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
CHD1O14646 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC25.29■■□□□ 1.64
CHD1O14646 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CHD1O14646 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC25.29■■□□□ 1.64
CHD1O14646 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
CHD1O14646 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC25.29■■□□□ 1.64
CHD1O14646 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC25.29■■□□□ 1.64
CHD1O14646 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC25.29■■□□□ 1.64
CHD1O14646 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHD1O14646 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
CHD1O14646 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC25.28■■□□□ 1.64
CHD1O14646 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC25.28■■□□□ 1.64
CHD1O14646 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC25.28■■□□□ 1.64
CHD1O14646 AL157791.1-201ENST00000553667 1699 ntBASIC25.28■■□□□ 1.64
CHD1O14646 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC25.28■■□□□ 1.64
CHD1O14646 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC25.28■■□□□ 1.64
CHD1O14646 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHD1O14646 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC25.28■■□□□ 1.64
CHD1O14646 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC25.28■■□□□ 1.64
CHD1O14646 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC25.28■■□□□ 1.64
CHD1O14646 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC25.28■■□□□ 1.64
CHD1O14646 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC25.28■■□□□ 1.64
CHD1O14646 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHD1O14646 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC25.28■■□□□ 1.64
CHD1O14646 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHD1O14646 AC060834.1-201ENST00000443027 2032 ntBASIC25.27■■□□□ 1.64
CHD1O14646 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
CHD1O14646 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
CHD1O14646 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
CHD1O14646 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHD1O14646 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHD1O14646 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC25.27■■□□□ 1.64
CHD1O14646 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHD1O14646 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC25.27■■□□□ 1.64
CHD1O14646 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC25.27■■□□□ 1.64
CHD1O14646 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC25.27■■□□□ 1.64
CHD1O14646 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC25.27■■□□□ 1.64
CHD1O14646 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CHD1O14646 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC25.26■■□□□ 1.63
CHD1O14646 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC25.26■■□□□ 1.63
CHD1O14646 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC25.26■■□□□ 1.63
CHD1O14646 PIN4P1-201ENST00000451079 396 ntBASIC25.26■■□□□ 1.63
CHD1O14646 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC25.26■■□□□ 1.63
CHD1O14646 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC25.26■■□□□ 1.63
CHD1O14646 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
CHD1O14646 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHD1O14646 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHD1O14646 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC25.26■■□□□ 1.63
CHD1O14646 ANKRD30BP2-201ENST00000435744 1610 ntBASIC25.26■■□□□ 1.63
CHD1O14646 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CHD1O14646 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHD1O14646 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
CHD1O14646 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
CHD1O14646 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC25.26■■□□□ 1.63
CHD1O14646 KRT8P14-201ENST00000414254 1442 ntBASIC25.26■■□□□ 1.63
CHD1O14646 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC25.26■■□□□ 1.63
CHD1O14646 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CHD1O14646 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CHD1O14646 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
CHD1O14646 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC25.26■■□□□ 1.63
CHD1O14646 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHD1O14646 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC25.26■■□□□ 1.63
CHD1O14646 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC25.26■■□□□ 1.63
CHD1O14646 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
CHD1O14646 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC25.26■■□□□ 1.63
CHD1O14646 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC25.25■■□□□ 1.63
CHD1O14646 TBC1D3J-201ENST00000620719 1426 ntBASIC25.25■■□□□ 1.63
CHD1O14646 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CHD1O14646 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC25.25■■□□□ 1.63
CHD1O14646 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHD1O14646 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC25.25■■□□□ 1.63
CHD1O14646 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC25.25■■□□□ 1.63
CHD1O14646 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CHD1O14646 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
CHD1O14646 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC25.25■■□□□ 1.63
CHD1O14646 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC25.25■■□□□ 1.63
CHD1O14646 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHD1O14646 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC25.25■■□□□ 1.63
CHD1O14646 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC25.25■■□□□ 1.63
CHD1O14646 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CHD1O14646 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC25.24■■□□□ 1.63
CHD1O14646 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHD1O14646 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC25.24■■□□□ 1.63
CHD1O14646 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC25.24■■□□□ 1.63
CHD1O14646 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms