Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.22■□□□□ 0.35
FOXN3O00409 AC010327.4-202ENST00000591484 748 ntBASIC17.22■□□□□ 0.35
FOXN3O00409 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.22■□□□□ 0.35
FOXN3O00409 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
FOXN3O00409 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
FOXN3O00409 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
FOXN3O00409 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXN3O00409 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.22■□□□□ 0.35
FOXN3O00409 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.22■□□□□ 0.35
FOXN3O00409 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.22■□□□□ 0.35
FOXN3O00409 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.22■□□□□ 0.35
FOXN3O00409 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
FOXN3O00409 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FOXN3O00409 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
FOXN3O00409 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FOXN3O00409 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXN3O00409 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXN3O00409 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
FOXN3O00409 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXN3O00409 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.21■□□□□ 0.35
FOXN3O00409 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXN3O00409 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
FOXN3O00409 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXN3O00409 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXN3O00409 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
FOXN3O00409 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXN3O00409 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXN3O00409 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
FOXN3O00409 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXN3O00409 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXN3O00409 AC005237.2-201ENST00000434368 219 ntBASIC17.21■□□□□ 0.35
FOXN3O00409 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXN3O00409 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.21■□□□□ 0.35
FOXN3O00409 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.21■□□□□ 0.35
FOXN3O00409 RARRES2P9-201ENST00000565168 469 ntBASIC17.21■□□□□ 0.35
FOXN3O00409 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.21■□□□□ 0.35
FOXN3O00409 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXN3O00409 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
FOXN3O00409 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXN3O00409 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXN3O00409 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXN3O00409 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXN3O00409 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
FOXN3O00409 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXN3O00409 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.21■□□□□ 0.34
FOXN3O00409 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
FOXN3O00409 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
FOXN3O00409 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
FOXN3O00409 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 AC073347.1-201ENST00000421633 2643 ntBASIC17.2■□□□□ 0.34
FOXN3O00409 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
FOXN3O00409 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.2■□□□□ 0.34
FOXN3O00409 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.2■□□□□ 0.34
FOXN3O00409 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
FOXN3O00409 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
FOXN3O00409 AC004987.2-201ENST00000395959 1148 ntBASIC17.2■□□□□ 0.34
FOXN3O00409 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.2■□□□□ 0.34
FOXN3O00409 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.2■□□□□ 0.34
FOXN3O00409 UPF3AP3-201ENST00000420996 769 ntBASIC17.2■□□□□ 0.34
FOXN3O00409 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.2■□□□□ 0.34
FOXN3O00409 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.2■□□□□ 0.34
FOXN3O00409 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.2■□□□□ 0.34
FOXN3O00409 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
FOXN3O00409 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 REXO1L1P-202ENST00000608646 1974 ntBASIC17.2■□□□□ 0.34
FOXN3O00409 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
FOXN3O00409 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
FOXN3O00409 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
FOXN3O00409 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXN3O00409 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXN3O00409 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXN3O00409 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXN3O00409 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXN3O00409 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXN3O00409 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
FOXN3O00409 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
FOXN3O00409 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXN3O00409 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXN3O00409 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
FOXN3O00409 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms