Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00473A8K010 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00473A8K010 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00473A8K010 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00473A8K010 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
LINC00473A8K010 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC00473A8K010 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00473A8K010 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00473A8K010 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00473A8K010 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
LINC00473A8K010 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00473A8K010 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
LINC00473A8K010 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00473A8K010 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00473A8K010 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC00473A8K010 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00473A8K010 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LINC00473A8K010 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00473A8K010 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00473A8K010 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00473A8K010 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00473A8K010 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC00473A8K010 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00473A8K010 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00473A8K010 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.11□□□□□ -0.31
LINC00473A8K010 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00473A8K010 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00473A8K010 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00473A8K010 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00473A8K010 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.11□□□□□ -0.31
LINC00473A8K010 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00473A8K010 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00473A8K010 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.11□□□□□ -0.31
LINC00473A8K010 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00473A8K010 AC092865.6-201ENST00000642101 219 ntBASIC13.11□□□□□ -0.31
LINC00473A8K010 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00473A8K010 AC092127.1-201ENST00000567093 3455 ntBASIC13.11□□□□□ -0.31
LINC00473A8K010 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00473A8K010 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00473A8K010 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00473A8K010 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00473A8K010 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00473A8K010 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00473A8K010 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00473A8K010 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
LINC00473A8K010 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00473A8K010 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LINC00473A8K010 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC00473A8K010 TMBIM7P-203ENST00000641617 1718 ntBASIC13.1□□□□□ -0.31
LINC00473A8K010 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00473A8K010 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
LINC00473A8K010 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00473A8K010 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00473A8K010 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00473A8K010 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00473A8K010 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00473A8K010 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00473A8K010 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00473A8K010 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC00473A8K010 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00473A8K010 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00473A8K010 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.1□□□□□ -0.31
LINC00473A8K010 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00473A8K010 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00473A8K010 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.1□□□□□ -0.31
LINC00473A8K010 AC112191.1-201ENST00000523689 701 ntBASIC13.1□□□□□ -0.31
LINC00473A8K010 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00473A8K010 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00473A8K010 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
LINC00473A8K010 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.1□□□□□ -0.31
LINC00473A8K010 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00473A8K010 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00473A8K010 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00473A8K010 AC073389.1-201ENST00000595595 795 ntBASIC13.1□□□□□ -0.31
LINC00473A8K010 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC00473A8K010 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC00473A8K010 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LINC00473A8K010 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC00473A8K010 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00473A8K010 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00473A8K010 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00473A8K010 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00473A8K010 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00473A8K010 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
LINC00473A8K010 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00473A8K010 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00473A8K010 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
LINC00473A8K010 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00473A8K010 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00473A8K010 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00473A8K010 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00473A8K010 AC023157.3-201ENST00000619086 2088 ntBASIC13.09□□□□□ -0.31
LINC00473A8K010 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00473A8K010 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
LINC00473A8K010 FOXO1B-201ENST00000504678 1527 ntBASIC13.09□□□□□ -0.31
LINC00473A8K010 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
LINC00473A8K010 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00473A8K010 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00473A8K010 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00473A8K010 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms