Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 AC104640.1-201ENST00000562617 2109 ntBASIC12.97□□□□□ -0.33
SRRM4A7MD48 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 MCCD1P2-201ENST00000423228 335 ntBASIC12.97□□□□□ -0.33
SRRM4A7MD48 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 ADH5P3-201ENST00000433842 1137 ntBASIC12.97□□□□□ -0.33
SRRM4A7MD48 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 POLD2P1-201ENST00000511220 997 ntBASIC12.97□□□□□ -0.33
SRRM4A7MD48 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 AC040169.1-201ENST00000565382 521 ntBASIC12.97□□□□□ -0.33
SRRM4A7MD48 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.97□□□□□ -0.33
SRRM4A7MD48 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 AP001282.1-201ENST00000531301 1499 ntBASIC12.97□□□□□ -0.33
SRRM4A7MD48 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.97□□□□□ -0.33
SRRM4A7MD48 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SRRM4A7MD48 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.96□□□□□ -0.33
SRRM4A7MD48 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SRRM4A7MD48 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SRRM4A7MD48 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.96□□□□□ -0.33
SRRM4A7MD48 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.96□□□□□ -0.33
SRRM4A7MD48 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.96□□□□□ -0.33
SRRM4A7MD48 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
SRRM4A7MD48 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.96□□□□□ -0.33
SRRM4A7MD48 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SRRM4A7MD48 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SRRM4A7MD48 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SRRM4A7MD48 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SRRM4A7MD48 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SRRM4A7MD48 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SRRM4A7MD48 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
SRRM4A7MD48 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SRRM4A7MD48 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.96□□□□□ -0.33
SRRM4A7MD48 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SRRM4A7MD48 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SRRM4A7MD48 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
SRRM4A7MD48 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SRRM4A7MD48 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.96□□□□□ -0.33
SRRM4A7MD48 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SRRM4A7MD48 AC142381.1-201ENST00000426099 345 ntBASIC12.96□□□□□ -0.33
SRRM4A7MD48 KRT8P48-201ENST00000515599 1220 ntBASIC12.96□□□□□ -0.33
SRRM4A7MD48 KRT18P58-201ENST00000527480 1120 ntBASIC12.96□□□□□ -0.33
SRRM4A7MD48 FAM86C2P-203ENST00000528684 1004 ntBASIC12.96□□□□□ -0.33
SRRM4A7MD48 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.96□□□□□ -0.33
SRRM4A7MD48 LINC01225-203ENST00000563550 1244 ntBASIC12.96□□□□□ -0.33
SRRM4A7MD48 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.96□□□□□ -0.33
SRRM4A7MD48 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.96□□□□□ -0.33
SRRM4A7MD48 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.96□□□□□ -0.33
SRRM4A7MD48 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SRRM4A7MD48 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.96□□□□□ -0.33
SRRM4A7MD48 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SRRM4A7MD48 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms