Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 BNIP3P1-202ENST00000550043 1585 ntBASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 KRT17P8-201ENST00000540749 863 ntBASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 RAB43P1-201ENST00000561790 589 ntBASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 WFDC1-204ENST00000613603 549 ntBASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 MIR8072-201ENST00000614241 80 ntBASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 AL033527.5-201ENST00000641382 801 ntBASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3BA6NDS4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TBC1D3BA6NDS4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.27■□□□□ 0.19
TBC1D3BA6NDS4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.27■□□□□ 0.19
TBC1D3BA6NDS4 PRORSD1P-202ENST00000563365 2154 ntBASIC16.27■□□□□ 0.19
TBC1D3BA6NDS4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TBC1D3BA6NDS4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TBC1D3BA6NDS4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
TBC1D3BA6NDS4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TBC1D3BA6NDS4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TBC1D3BA6NDS4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.27■□□□□ 0.19
TBC1D3BA6NDS4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TBC1D3BA6NDS4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 AC079328.2-201ENST00000561241 3354 ntBASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 AC080080.1-201ENST00000625121 2420 ntBASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 CDC14C-201ENST00000428251 1719 ntBASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 AC022211.2-201ENST00000585075 2527 ntBASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TBC1D3BA6NDS4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TBC1D3BA6NDS4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms