Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 MIR346-201ENST00000362234 95 ntBASIC14.82□□□□□ -0.04
CDHR4A6H8M9 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 MKNK2P1-201ENST00000437526 628 ntBASIC14.82□□□□□ -0.04
CDHR4A6H8M9 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 SPDYE11-202ENST00000450699 704 ntBASIC14.82□□□□□ -0.04
CDHR4A6H8M9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 LINC01225-203ENST00000563550 1244 ntBASIC14.82□□□□□ -0.04
CDHR4A6H8M9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 SPDYE9P-201ENST00000570642 692 ntBASIC14.82□□□□□ -0.04
CDHR4A6H8M9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 SPDYE10P-202ENST00000612005 668 ntBASIC14.82□□□□□ -0.04
CDHR4A6H8M9 SPDYE8P-202ENST00000612377 668 ntBASIC14.82□□□□□ -0.04
CDHR4A6H8M9 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDHR4A6H8M9 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 AP003680.1-201ENST00000598970 3660 ntBASIC14.81□□□□□ -0.04
CDHR4A6H8M9 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 AC104640.1-201ENST00000562617 2109 ntBASIC14.81□□□□□ -0.04
CDHR4A6H8M9 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 FAM220BP-201ENST00000377689 816 ntBASIC14.81□□□□□ -0.04
CDHR4A6H8M9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 SPCS2P4-201ENST00000436160 681 ntBASIC14.81□□□□□ -0.04
CDHR4A6H8M9 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 AC079140.1-201ENST00000508039 487 ntBASIC14.81□□□□□ -0.04
CDHR4A6H8M9 KRT8P48-201ENST00000515599 1220 ntBASIC14.81□□□□□ -0.04
CDHR4A6H8M9 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 AP000842.3-202ENST00000569238 1080 ntBASIC14.81□□□□□ -0.04
CDHR4A6H8M9 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 MTDHP5-201ENST00000598980 586 ntBASIC14.81□□□□□ -0.04
CDHR4A6H8M9 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.81□□□□□ -0.04
CDHR4A6H8M9 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDHR4A6H8M9 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDHR4A6H8M9 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.8□□□□□ -0.04
CDHR4A6H8M9 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDHR4A6H8M9 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.8□□□□□ -0.04
CDHR4A6H8M9 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDHR4A6H8M9 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.8□□□□□ -0.04
CDHR4A6H8M9 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDHR4A6H8M9 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CDHR4A6H8M9 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms