Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 MTDHP4-201ENST00000600287 670 ntBASIC17.54■□□□□ 0.4
CCDC66A2RUB6 AL121772.3-201ENST00000610840 674 ntBASIC17.54■□□□□ 0.4
CCDC66A2RUB6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 AC131009.4-201ENST00000624048 1740 ntBASIC17.54■□□□□ 0.4
CCDC66A2RUB6 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 PTENP1-202ENST00000532280 3996 ntBASIC17.54■□□□□ 0.4
CCDC66A2RUB6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC66A2RUB6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 AL596087.1-201ENST00000400979 1969 ntBASIC17.53■□□□□ 0.4
CCDC66A2RUB6 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 PTCHD3P3-201ENST00000403073 906 ntBASIC17.53■□□□□ 0.4
CCDC66A2RUB6 FGFR3P6-201ENST00000457012 610 ntBASIC17.53■□□□□ 0.4
CCDC66A2RUB6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 SART3-203ENST00000546611 1184 ntBASIC17.53■□□□□ 0.4
CCDC66A2RUB6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC66A2RUB6 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 PI4KAP1-204ENST00000612579 1703 ntBASIC17.52■□□□□ 0.4
CCDC66A2RUB6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 SCARNA2-201ENST00000458748 420 ntBASIC17.52■□□□□ 0.4
CCDC66A2RUB6 KRT18P31-201ENST00000506277 1292 ntBASIC17.52■□□□□ 0.4
CCDC66A2RUB6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC66A2RUB6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC66A2RUB6 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC66A2RUB6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.52■□□□□ 0.39
CCDC66A2RUB6 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC66A2RUB6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CCDC66A2RUB6 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
CCDC66A2RUB6 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC66A2RUB6 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC66A2RUB6 AC005840.4-201ENST00000541242 2494 ntBASIC17.52■□□□□ 0.39
CCDC66A2RUB6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC66A2RUB6 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 AC138969.2-201ENST00000532739 9932 ntBASIC17.51■□□□□ 0.39
CCDC66A2RUB6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 CICP24-201ENST00000605464 2705 ntBASIC17.51■□□□□ 0.39
CCDC66A2RUB6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC66A2RUB6 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.51■□□□□ 0.39
CCDC66A2RUB6 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms