Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TCRBV3S1A0A5B6 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TCRBV3S1A0A5B6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.08■□□□□ 0.01
TCRBV3S1A0A5B6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0.01
TCRBV3S1A0A5B6 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TCRBV3S1A0A5B6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TCRBV3S1A0A5B6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.08■□□□□ 0.01
TCRBV3S1A0A5B6 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
TCRBV3S1A0A5B6 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 RCN1P1-201ENST00000400413 996 ntBASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 AP000867.3-201ENST00000524675 377 ntBASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 MIR3909-201ENST00000579518 119 ntBASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 GGTLC5P-201ENST00000617623 998 ntBASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 AC116407.4-201ENST00000623319 1061 ntBASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 AC007686.3-201ENST00000619017 3487 ntBASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 AC148477.4-201ENST00000613430 1793 ntBASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCRBV3S1A0A5B6 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 KRT16P4-201ENST00000453883 522 ntBASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 FAM86EP-206ENST00000510506 987 ntBASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV3S1A0A5B6 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.06■□□□□ 0
TCRBV3S1A0A5B6 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms