Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AC010336.2-201ENST00000564226 506 ntBASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC025048.3-201ENST00000590609 569 ntBASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC005702.4-201ENST00000618393 416 ntBASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC087499.5-201ENST00000452760 1342 ntBASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 MIR943-201ENST00000401286 94 ntBASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 TSSK5P-201ENST00000423978 907 ntBASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 AL844908.2-201ENST00000609461 460 ntBASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 AL590560.3-201ENST00000623350 461 ntBASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 Z97205.2-201ENST00000564697 1639 ntBASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC105917.1-201ENST00000506637 2539 ntBASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC100757.3-201ENST00000622361 1406 ntBASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 AL607033.1-201ENST00000623900 1599 ntBASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV5-4A0A0C4DH59 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC008741.2-201ENST00000612792 3115 ntBASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC055876.3-201ENST00000431496 288 ntBASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 TARDBPP1-201ENST00000442013 1203 ntBASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 AL390955.2-201ENST00000603032 514 ntBASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC138649.4-201ENST00000612222 287 ntBASIC15.73■□□□□ 0.11
TRBV5-4A0A0C4DH59 AC093512.1-201ENST00000617969 520 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms