Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC26.18■■□□□ 1.78
BIVM-ERCC5R4GMW8 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC26.18■■□□□ 1.78
BIVM-ERCC5R4GMW8 RNA5SP423-201ENST00000517127 109 ntBASIC26.18■■□□□ 1.78
BIVM-ERCC5R4GMW8 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC26.18■■□□□ 1.78
BIVM-ERCC5R4GMW8 CYGB-203ENST00000589145 788 ntTSL 3 BASIC26.18■■□□□ 1.78
BIVM-ERCC5R4GMW8 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC26.18■■□□□ 1.78
BIVM-ERCC5R4GMW8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
BIVM-ERCC5R4GMW8 MFF-204ENST00000353339 2186 ntTSL 5 BASIC26.18■■□□□ 1.78
BIVM-ERCC5R4GMW8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
BIVM-ERCC5R4GMW8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
BIVM-ERCC5R4GMW8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC26.18■■□□□ 1.78
BIVM-ERCC5R4GMW8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
BIVM-ERCC5R4GMW8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC26.18■■□□□ 1.78
BIVM-ERCC5R4GMW8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
BIVM-ERCC5R4GMW8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
BIVM-ERCC5R4GMW8 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 AC091271.1-201ENST00000611877 1162 ntBASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 RPS3-201ENST00000278572 907 ntTSL 3 BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
BIVM-ERCC5R4GMW8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
BIVM-ERCC5R4GMW8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
BIVM-ERCC5R4GMW8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
BIVM-ERCC5R4GMW8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
BIVM-ERCC5R4GMW8 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC26.16■■□□□ 1.78
BIVM-ERCC5R4GMW8 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
BIVM-ERCC5R4GMW8 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
BIVM-ERCC5R4GMW8 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
BIVM-ERCC5R4GMW8 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC26.16■■□□□ 1.78
BIVM-ERCC5R4GMW8 SCARNA20.5-201ENST00000516991 142 ntBASIC26.16■■□□□ 1.78
BIVM-ERCC5R4GMW8 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC26.16■■□□□ 1.78
BIVM-ERCC5R4GMW8 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC26.16■■□□□ 1.78
BIVM-ERCC5R4GMW8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC26.16■■□□□ 1.78
BIVM-ERCC5R4GMW8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
BIVM-ERCC5R4GMW8 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
BIVM-ERCC5R4GMW8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
BIVM-ERCC5R4GMW8 AC069224.1-201ENST00000566372 1715 ntBASIC26.16■■□□□ 1.78
BIVM-ERCC5R4GMW8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 AL138799.1-201ENST00000448213 1675 ntBASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 EIF3FP3-201ENST00000434851 1086 ntBASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 AC023310.1-201ENST00000554836 735 ntBASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 AC124067.4-201ENST00000519691 2379 ntBASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
BIVM-ERCC5R4GMW8 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
BIVM-ERCC5R4GMW8 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
BIVM-ERCC5R4GMW8 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
BIVM-ERCC5R4GMW8 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
BIVM-ERCC5R4GMW8 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
BIVM-ERCC5R4GMW8 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
BIVM-ERCC5R4GMW8 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC26.14■■□□□ 1.78
BIVM-ERCC5R4GMW8 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
BIVM-ERCC5R4GMW8 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC26.14■■□□□ 1.78
BIVM-ERCC5R4GMW8 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC26.14■■□□□ 1.78
BIVM-ERCC5R4GMW8 AC105129.2-201ENST00000559536 390 ntBASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms