Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 MIR346-201ENST00000362234 95 ntBASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 SPCS2P4-201ENST00000436160 681 ntBASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 ACTG1P14-201ENST00000446382 1122 ntBASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 AC079140.1-201ENST00000508039 487 ntBASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CYP46A1Q9Y6A2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 RNA5SP410-201ENST00000516285 106 ntBASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 LINC01225-203ENST00000563550 1244 ntBASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 AP000842.3-202ENST00000569238 1080 ntBASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.1■□□□□ 0.65
CYP46A1Q9Y6A2 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 AL691432.1-201ENST00000596308 1422 ntBASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 FAM220BP-201ENST00000377689 816 ntBASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 MKNK2P1-201ENST00000437526 628 ntBASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 AC243562.2-201ENST00000561247 970 ntBASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 MTDHP5-201ENST00000598980 586 ntBASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CYP46A1Q9Y6A2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms