Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AGAP14-201ENST00000624701 2060 ntBASIC15.29■□□□□ 0.04
AP4S1Q9Y587 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 AC011477.6-201ENST00000604980 1927 ntBASIC15.28■□□□□ 0.04
AP4S1Q9Y587 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 HAUS4P1-201ENST00000406739 1145 ntBASIC15.28■□□□□ 0.04
AP4S1Q9Y587 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 BNIP3P18-201ENST00000593976 575 ntBASIC15.28■□□□□ 0.04
AP4S1Q9Y587 AC064862.7-201ENST00000604520 867 ntBASIC15.28■□□□□ 0.04
AP4S1Q9Y587 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.28■□□□□ 0.04
AP4S1Q9Y587 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.28■□□□□ 0.04
AP4S1Q9Y587 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 AC073508.3-201ENST00000619697 1419 ntBASIC15.27■□□□□ 0.04
AP4S1Q9Y587 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 ARMC10P1-201ENST00000313754 855 ntBASIC15.27■□□□□ 0.04
AP4S1Q9Y587 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 AC087499.1-201ENST00000418141 1075 ntBASIC15.27■□□□□ 0.04
AP4S1Q9Y587 AK4P3-201ENST00000418260 669 ntBASIC15.27■□□□□ 0.04
AP4S1Q9Y587 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 ABCD1P5-201ENST00000445663 754 ntBASIC15.27■□□□□ 0.04
AP4S1Q9Y587 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 NTF6B-201ENST00000591913 560 ntBASIC15.27■□□□□ 0.04
AP4S1Q9Y587 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.27■□□□□ 0.04
AP4S1Q9Y587 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP4S1Q9Y587 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.27■□□□□ 0.03
AP4S1Q9Y587 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
AP4S1Q9Y587 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP4S1Q9Y587 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
AP4S1Q9Y587 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP4S1Q9Y587 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms