Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MIR648-201ENST00000385046 94 ntBASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 AC026396.1-201ENST00000419388 421 ntBASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 SLC25A1P1-201ENST00000528351 927 ntBASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 KRT19P2-202ENST00000557173 1012 ntBASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 AC120114.3-201ENST00000611923 658 ntBASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 BX640515.1-201ENST00000617215 977 ntBASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 AC005622.1-201ENST00000636801 1703 ntBASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 ZNF259P1-201ENST00000407656 1365 ntBASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.17□□□□□ -0.14
RHBDD3Q9Y3P4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 AL513477.1-201ENST00000602865 2407 ntBASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 AC073347.1-201ENST00000421633 2643 ntBASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 AL009183.1-201ENST00000603760 355 ntBASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 PPT1-215ENST00000641471 2368 ntBASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RHBDD3Q9Y3P4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RHBDD3Q9Y3P4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RHBDD3Q9Y3P4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.15□□□□□ -0.14
RHBDD3Q9Y3P4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RHBDD3Q9Y3P4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.15□□□□□ -0.14
RHBDD3Q9Y3P4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.15□□□□□ -0.14
RHBDD3Q9Y3P4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.15□□□□□ -0.14
RHBDD3Q9Y3P4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RHBDD3Q9Y3P4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RHBDD3Q9Y3P4 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RHBDD3Q9Y3P4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RHBDD3Q9Y3P4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RHBDD3Q9Y3P4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RHBDD3Q9Y3P4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RHBDD3Q9Y3P4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.15□□□□□ -0.14
RHBDD3Q9Y3P4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms