Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
ZC3H4Q9UPT8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 PTPA-217ENST00000434095 870 ntTSL 2 BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 RPSAP36-202ENST00000494591 1261 ntBASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 MIR7845-201ENST00000618396 99 ntBASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 AD000864.1-201ENST00000624076 2295 ntBASIC19.29■□□□□ 0.68
ZC3H4Q9UPT8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 AC004987.2-201ENST00000395959 1148 ntBASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 RPL17P11-201ENST00000417593 544 ntBASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 AC138951.2-201ENST00000623455 1161 ntBASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 LINC02012-201ENST00000608206 1725 ntBASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 AL512652.2-201ENST00000625156 1716 ntBASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 AC092978.1-202ENST00000637590 1327 ntBASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZC3H4Q9UPT8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 TEX30-203ENST00000376022 828 ntTSL 2 BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 PTPA-218ENST00000435132 618 ntTSL 2 BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 ACR-203ENST00000529621 708 ntTSL 5 BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.27■□□□□ 0.68
ZC3H4Q9UPT8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZC3H4Q9UPT8 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.67
ZC3H4Q9UPT8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZC3H4Q9UPT8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms