Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 AL691432.1-201ENST00000596308 1422 ntBASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 PRAL-201ENST00000624952 3286 ntBASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 RPS8P6-201ENST00000426177 609 ntBASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 SPDYE14P-201ENST00000442619 822 ntBASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 AC027612.4-201ENST00000605371 583 ntBASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 AL136982.4-201ENST00000437689 1740 ntBASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 AP003680.1-201ENST00000598970 3660 ntBASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 AC011477.6-201ENST00000604980 1927 ntBASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP4E1Q9UPM8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 DNAJB3-202ENST00000449667 1266 ntBASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
AP4E1Q9UPM8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
AP4E1Q9UPM8 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
AP4E1Q9UPM8 AL162727.3-201ENST00000635661 2787 ntBASIC16.71■□□□□ 0.26
AP4E1Q9UPM8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 AL139010.1-201ENST00000454878 894 ntBASIC16.7■□□□□ 0.26
AP4E1Q9UPM8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms