Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 PHKG1P2-201ENST00000457537 863 ntBASIC16.95■□□□□ 0.3
CDH9Q9ULB4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 AC104794.3-201ENST00000566840 1248 ntBASIC16.95■□□□□ 0.3
CDH9Q9ULB4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH9Q9ULB4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 AC011477.6-201ENST00000604980 1927 ntBASIC16.94■□□□□ 0.3
CDH9Q9ULB4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 PIN1P1-201ENST00000412108 996 ntBASIC16.94■□□□□ 0.3
CDH9Q9ULB4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 AL450472.2-201ENST00000603663 1156 ntBASIC16.94■□□□□ 0.3
CDH9Q9ULB4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.94■□□□□ 0.3
CDH9Q9ULB4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 AL035633.1-201ENST00000406139 838 ntBASIC16.93■□□□□ 0.3
CDH9Q9ULB4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 SPDYE18-201ENST00000510091 1050 ntBASIC16.93■□□□□ 0.3
CDH9Q9ULB4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 SRD5A3P1-201ENST00000603021 949 ntBASIC16.93■□□□□ 0.3
CDH9Q9ULB4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH9Q9ULB4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms