Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF346Q9UL40 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 AC004832.2-201ENST00000426397 482 ntBASIC14.53□□□□□ -0.08
ZNF346Q9UL40 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 AC092865.5-201ENST00000545435 363 ntBASIC14.53□□□□□ -0.08
ZNF346Q9UL40 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 AL138918.1-201ENST00000568306 659 ntBASIC14.53□□□□□ -0.08
ZNF346Q9UL40 MIR3687-2-201ENST00000577708 61 ntBASIC14.53□□□□□ -0.08
ZNF346Q9UL40 MTDHP5-201ENST00000598980 586 ntBASIC14.53□□□□□ -0.08
ZNF346Q9UL40 AC099522.2-201ENST00000607001 744 ntBASIC14.53□□□□□ -0.08
ZNF346Q9UL40 MIR3687-1-201ENST00000614492 61 ntBASIC14.53□□□□□ -0.08
ZNF346Q9UL40 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF346Q9UL40 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF346Q9UL40 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
ZNF346Q9UL40 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF346Q9UL40 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF346Q9UL40 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF346Q9UL40 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF346Q9UL40 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF346Q9UL40 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF346Q9UL40 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF346Q9UL40 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF346Q9UL40 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF346Q9UL40 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.52□□□□□ -0.08
ZNF346Q9UL40 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF346Q9UL40 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.52□□□□□ -0.08
ZNF346Q9UL40 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF346Q9UL40 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF346Q9UL40 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF346Q9UL40 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 RARRES2P8-201ENST00000566335 367 ntBASIC14.52□□□□□ -0.09
ZNF346Q9UL40 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 MIR4321-201ENST00000592276 80 ntBASIC14.52□□□□□ -0.09
ZNF346Q9UL40 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF346Q9UL40 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF346Q9UL40 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.51□□□□□ -0.09
ZNF346Q9UL40 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF346Q9UL40 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF346Q9UL40 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
ZNF346Q9UL40 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF346Q9UL40 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.51□□□□□ -0.09
ZNF346Q9UL40 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.51□□□□□ -0.09
ZNF346Q9UL40 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF346Q9UL40 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF346Q9UL40 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.51□□□□□ -0.09
ZNF346Q9UL40 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF346Q9UL40 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF346Q9UL40 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF346Q9UL40 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms