Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 ZNF890P-202ENST00000530367 1156 ntBASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 AC061975.2-201ENST00000581722 295 ntBASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 AC026979.3-201ENST00000607315 403 ntBASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 TEX28P1-201ENST00000613479 1221 ntBASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 TEX28P2-201ENST00000617764 1221 ntBASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 AC025048.6-201ENST00000634326 1161 ntBASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXD3Q9UJU5 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 AC103702.1-201ENST00000548801 2630 ntBASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 SPTLC1P1-201ENST00000447199 261 ntBASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 AC105021.1-202ENST00000570572 669 ntBASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXD3Q9UJU5 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 AL353779.1-201ENST00000434793 351 ntBASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 SERBP1P3-201ENST00000459980 809 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms