Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC31.99■■■□□ 2.71
CCDC180Q9P1Z9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC180Q9P1Z9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC180Q9P1Z9 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC180Q9P1Z9 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC180Q9P1Z9 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC31.98■■■□□ 2.71
CCDC180Q9P1Z9 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC31.98■■■□□ 2.71
CCDC180Q9P1Z9 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC180Q9P1Z9 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC31.98■■■□□ 2.71
CCDC180Q9P1Z9 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC180Q9P1Z9 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC31.98■■■□□ 2.71
CCDC180Q9P1Z9 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC31.98■■■□□ 2.71
CCDC180Q9P1Z9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC180Q9P1Z9 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC31.98■■■□□ 2.71
CCDC180Q9P1Z9 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC31.98■■■□□ 2.71
CCDC180Q9P1Z9 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC180Q9P1Z9 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC31.98■■■□□ 2.71
CCDC180Q9P1Z9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC180Q9P1Z9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 AC103988.2-201ENST00000561804 725 ntBASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 AC100757.4-201ENST00000626934 759 ntBASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 AL136309.1-201ENST00000403917 691 ntBASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 AC234782.1-201ENST00000451950 919 ntBASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 MARK2P5-201ENST00000507649 634 ntBASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 AL161670.2-201ENST00000557650 1227 ntBASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 MIR7845-201ENST00000618396 99 ntBASIC31.97■■■□□ 2.71
CCDC180Q9P1Z9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC180Q9P1Z9 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC180Q9P1Z9 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC31.96■■■□□ 2.71
CCDC180Q9P1Z9 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC31.96■■■□□ 2.71
CCDC180Q9P1Z9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC180Q9P1Z9 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC180Q9P1Z9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC180Q9P1Z9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC180Q9P1Z9 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC31.96■■■□□ 2.71
CCDC180Q9P1Z9 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC180Q9P1Z9 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC180Q9P1Z9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC180Q9P1Z9 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC31.96■■■□□ 2.71
CCDC180Q9P1Z9 YRDCP1-201ENST00000621419 643 ntBASIC31.96■■■□□ 2.71
CCDC180Q9P1Z9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC180Q9P1Z9 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC31.96■■■□□ 2.71
CCDC180Q9P1Z9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC31.95■■■□□ 2.71
CCDC180Q9P1Z9 LRRFIP1P1-201ENST00000498774 2246 ntBASIC31.95■■■□□ 2.71
CCDC180Q9P1Z9 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC180Q9P1Z9 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC180Q9P1Z9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC180Q9P1Z9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC31.95■■■□□ 2.71
CCDC180Q9P1Z9 PDIA3P2-201ENST00000428073 158 ntBASIC31.95■■■□□ 2.71
CCDC180Q9P1Z9 AL596276.2-201ENST00000447525 331 ntBASIC31.95■■■□□ 2.71
CCDC180Q9P1Z9 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC31.95■■■□□ 2.71
CCDC180Q9P1Z9 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC31.95■■■□□ 2.71
CCDC180Q9P1Z9 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC31.95■■■□□ 2.71
CCDC180Q9P1Z9 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC31.95■■■□□ 2.71
CCDC180Q9P1Z9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
CCDC180Q9P1Z9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
CCDC180Q9P1Z9 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
CCDC180Q9P1Z9 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
CCDC180Q9P1Z9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC31.95■■■□□ 2.7
CCDC180Q9P1Z9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC180Q9P1Z9 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC180Q9P1Z9 AC114812.1-204ENST00000449669 728 ntBASIC31.94■■■□□ 2.7
CCDC180Q9P1Z9 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC31.94■■■□□ 2.7
CCDC180Q9P1Z9 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC31.94■■■□□ 2.7
CCDC180Q9P1Z9 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC31.94■■■□□ 2.7
CCDC180Q9P1Z9 MIR4783-201ENST00000580343 82 ntBASIC31.94■■■□□ 2.7
CCDC180Q9P1Z9 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
CCDC180Q9P1Z9 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
CCDC180Q9P1Z9 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC31.94■■■□□ 2.7
CCDC180Q9P1Z9 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC180Q9P1Z9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC180Q9P1Z9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC180Q9P1Z9 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC180Q9P1Z9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC180Q9P1Z9 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC180Q9P1Z9 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC31.93■■■□□ 2.7
CCDC180Q9P1Z9 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC180Q9P1Z9 GHSR-202ENST00000427970 912 ntBASIC31.93■■■□□ 2.7
CCDC180Q9P1Z9 AC104784.1-201ENST00000473096 294 ntBASIC31.93■■■□□ 2.7
CCDC180Q9P1Z9 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC31.93■■■□□ 2.7
CCDC180Q9P1Z9 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC31.93■■■□□ 2.7
CCDC180Q9P1Z9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC180Q9P1Z9 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC31.93■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms