Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 BTBD7P1-201ENST00000447253 1453 ntBASIC19.54■□□□□ 0.72
HMG20BQ9P0W2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 MIR648-201ENST00000385046 94 ntBASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 AC004987.2-201ENST00000395959 1148 ntBASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 MIR6069-201ENST00000620069 79 ntBASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.53■□□□□ 0.72
HMG20BQ9P0W2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMG20BQ9P0W2 AL603832.2-201ENST00000566195 2125 ntBASIC19.52■□□□□ 0.72
HMG20BQ9P0W2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.52■□□□□ 0.72
HMG20BQ9P0W2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
HMG20BQ9P0W2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
HMG20BQ9P0W2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
HMG20BQ9P0W2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMG20BQ9P0W2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
HMG20BQ9P0W2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.52■□□□□ 0.72
HMG20BQ9P0W2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMG20BQ9P0W2 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMG20BQ9P0W2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.52■□□□□ 0.72
HMG20BQ9P0W2 AC114501.2-201ENST00000439631 535 ntBASIC19.52■□□□□ 0.72
HMG20BQ9P0W2 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.52■□□□□ 0.72
HMG20BQ9P0W2 AC104794.3-201ENST00000566840 1248 ntBASIC19.52■□□□□ 0.72
HMG20BQ9P0W2 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC19.52■□□□□ 0.72
HMG20BQ9P0W2 AL109936.8-201ENST00000641772 604 ntBASIC19.52■□□□□ 0.72
HMG20BQ9P0W2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMG20BQ9P0W2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMG20BQ9P0W2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMG20BQ9P0W2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMG20BQ9P0W2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.52■□□□□ 0.72
HMG20BQ9P0W2 BNIP3P1-202ENST00000550043 1585 ntBASIC19.52■□□□□ 0.71
HMG20BQ9P0W2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
HMG20BQ9P0W2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HMG20BQ9P0W2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HMG20BQ9P0W2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HMG20BQ9P0W2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 FO393414.2-201ENST00000405153 598 ntBASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 GNAQP1-201ENST00000444815 1067 ntBASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 EEF1DP4-201ENST00000446006 880 ntBASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 CRB3P1-201ENST00000449338 276 ntBASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 AL365203.3-201ENST00000609742 2057 ntBASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.51■□□□□ 0.71
HMG20BQ9P0W2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms