Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.4■□□□□ 0.06
CCM2LQ9NUG4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.4■□□□□ 0.06
CCM2LQ9NUG4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.4■□□□□ 0.06
CCM2LQ9NUG4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.4■□□□□ 0.06
CCM2LQ9NUG4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.4■□□□□ 0.06
CCM2LQ9NUG4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CCM2LQ9NUG4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CCM2LQ9NUG4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCM2LQ9NUG4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCM2LQ9NUG4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCM2LQ9NUG4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.4■□□□□ 0.06
CCM2LQ9NUG4 NORAD-201ENST00000565493 5339 ntBASIC15.4■□□□□ 0.06
CCM2LQ9NUG4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCM2LQ9NUG4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCM2LQ9NUG4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCM2LQ9NUG4 AP003680.1-201ENST00000598970 3660 ntBASIC15.4■□□□□ 0.06
CCM2LQ9NUG4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCM2LQ9NUG4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCM2LQ9NUG4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.4■□□□□ 0.06
CCM2LQ9NUG4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCM2LQ9NUG4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 AC023908.3-201ENST00000564211 3047 ntBASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 AC007967.2-201ENST00000432613 625 ntBASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 AC002347.1-201ENST00000569543 541 ntBASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 MIR3197-201ENST00000582241 73 ntBASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 AC005622.1-201ENST00000636801 1703 ntBASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 KRT18P28-201ENST00000453838 1332 ntBASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCM2LQ9NUG4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 AC007292.2-201ENST00000593524 1812 ntBASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 SLC22A20-204ENST00000530038 1673 ntBASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 AC211486.1-202ENST00000416371 468 ntBASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 AC023274.1-201ENST00000418278 595 ntBASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 AC004832.2-201ENST00000426397 482 ntBASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 ABCD1P5-201ENST00000445663 754 ntBASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 AC211476.1-201ENST00000503899 468 ntBASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 AL596442.2-201ENST00000610240 980 ntBASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCM2LQ9NUG4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms