Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.98■□□□□ 0.31
TLR9Q9NR96 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TLR9Q9NR96 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TLR9Q9NR96 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TLR9Q9NR96 AC099336.1-201ENST00000417053 1171 ntBASIC16.98■□□□□ 0.31
TLR9Q9NR96 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TLR9Q9NR96 EEF1DP4-201ENST00000446006 880 ntBASIC16.98■□□□□ 0.31
TLR9Q9NR96 AL355994.2-201ENST00000447882 704 ntBASIC16.98■□□□□ 0.31
TLR9Q9NR96 FAM86LP-201ENST00000478302 853 ntBASIC16.98■□□□□ 0.31
TLR9Q9NR96 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TLR9Q9NR96 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.98■□□□□ 0.31
TLR9Q9NR96 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.98■□□□□ 0.31
TLR9Q9NR96 AC243562.2-201ENST00000561247 970 ntBASIC16.98■□□□□ 0.31
TLR9Q9NR96 AL359711.2-201ENST00000563105 872 ntBASIC16.98■□□□□ 0.31
TLR9Q9NR96 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.98■□□□□ 0.31
TLR9Q9NR96 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.98■□□□□ 0.31
TLR9Q9NR96 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.98■□□□□ 0.31
TLR9Q9NR96 BRI3BPP1-201ENST00000594224 787 ntBASIC16.98■□□□□ 0.31
TLR9Q9NR96 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TLR9Q9NR96 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TLR9Q9NR96 KRT8P44-201ENST00000441609 1350 ntBASIC16.98■□□□□ 0.31
TLR9Q9NR96 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.98■□□□□ 0.31
TLR9Q9NR96 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.98■□□□□ 0.31
TLR9Q9NR96 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.98■□□□□ 0.31
TLR9Q9NR96 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.98■□□□□ 0.31
TLR9Q9NR96 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TLR9Q9NR96 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.98■□□□□ 0.31
TLR9Q9NR96 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TLR9Q9NR96 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.98■□□□□ 0.31
TLR9Q9NR96 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TLR9Q9NR96 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.97■□□□□ 0.31
TLR9Q9NR96 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.97■□□□□ 0.31
TLR9Q9NR96 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.97■□□□□ 0.31
TLR9Q9NR96 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TLR9Q9NR96 TUBB1P2-201ENST00000422712 1306 ntBASIC16.97■□□□□ 0.31
TLR9Q9NR96 TUBB1P1-201ENST00000503144 1300 ntBASIC16.97■□□□□ 0.31
TLR9Q9NR96 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.97■□□□□ 0.31
TLR9Q9NR96 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TLR9Q9NR96 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TLR9Q9NR96 KRT8P37-201ENST00000451609 1420 ntBASIC16.97■□□□□ 0.31
TLR9Q9NR96 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TLR9Q9NR96 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TLR9Q9NR96 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.97■□□□□ 0.31
TLR9Q9NR96 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TLR9Q9NR96 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.97■□□□□ 0.31
TLR9Q9NR96 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.97■□□□□ 0.31
TLR9Q9NR96 BRWD1P1-201ENST00000401091 371 ntBASIC16.97■□□□□ 0.31
TLR9Q9NR96 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TLR9Q9NR96 BCRP2-202ENST00000447763 634 ntBASIC16.97■□□□□ 0.31
TLR9Q9NR96 BCRP6-201ENST00000510112 632 ntBASIC16.97■□□□□ 0.31
TLR9Q9NR96 BCRP7-201ENST00000511549 544 ntBASIC16.97■□□□□ 0.31
TLR9Q9NR96 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.97■□□□□ 0.31
TLR9Q9NR96 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TLR9Q9NR96 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.97■□□□□ 0.31
TLR9Q9NR96 MIR6869-201ENST00000619434 62 ntBASIC16.97■□□□□ 0.31
TLR9Q9NR96 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.97■□□□□ 0.31
TLR9Q9NR96 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TLR9Q9NR96 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TLR9Q9NR96 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.97■□□□□ 0.31
TLR9Q9NR96 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
TLR9Q9NR96 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TLR9Q9NR96 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TLR9Q9NR96 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TLR9Q9NR96 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TLR9Q9NR96 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.97■□□□□ 0.31
TLR9Q9NR96 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.97■□□□□ 0.31
TLR9Q9NR96 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TLR9Q9NR96 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TLR9Q9NR96 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
TLR9Q9NR96 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.97■□□□□ 0.31
TLR9Q9NR96 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.97■□□□□ 0.31
TLR9Q9NR96 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.97■□□□□ 0.31
TLR9Q9NR96 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TLR9Q9NR96 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.96■□□□□ 0.31
TLR9Q9NR96 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TLR9Q9NR96 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
TLR9Q9NR96 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TLR9Q9NR96 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TLR9Q9NR96 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TLR9Q9NR96 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TLR9Q9NR96 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TLR9Q9NR96 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.96■□□□□ 0.31
TLR9Q9NR96 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.96■□□□□ 0.31
TLR9Q9NR96 AC005229.1-201ENST00000392885 409 ntBASIC16.96■□□□□ 0.31
TLR9Q9NR96 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.96■□□□□ 0.31
TLR9Q9NR96 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.96■□□□□ 0.31
TLR9Q9NR96 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.96■□□□□ 0.31
TLR9Q9NR96 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.96■□□□□ 0.31
TLR9Q9NR96 RNA5SP412-201ENST00000516234 123 ntBASIC16.96■□□□□ 0.31
TLR9Q9NR96 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TLR9Q9NR96 PTP4A1P2-201ENST00000546033 454 ntBASIC16.96■□□□□ 0.31
TLR9Q9NR96 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.96■□□□□ 0.31
TLR9Q9NR96 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.96■□□□□ 0.31
TLR9Q9NR96 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.96■□□□□ 0.31
TLR9Q9NR96 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TLR9Q9NR96 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TLR9Q9NR96 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
TLR9Q9NR96 AL118508.1-201ENST00000613502 2345 ntBASIC16.96■□□□□ 0.3
TLR9Q9NR96 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
TLR9Q9NR96 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms